RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CHD6Q8TD26 2715 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 POLQO75417 2590 aa10.25□□□□□ -0.77
CLCN6-206ENST00000376496 TRBV23-1A0A0A0MS06 115 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 BORCS7-ASMTA0A0B4J1R7 106 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 A0A1B0GV50 99 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 ATG12O94817 140 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 RELBQ01201 579 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 AKR1C1Q04828 323 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 OR10A7Q8NGE5 316 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 DTD1Q8TEA8 209 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 RITA1Q96K30 269 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 UBR5O95071 2799 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-206ENST00000376496 IGHV2-26A0A0B4J1V2 119 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 SULT1A1P50225 295 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 KLRD1Q13241 179 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 TOR2AQ5JU69 321 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 STX12Q86Y82 276 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 OR9G1Q8NH87 305 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 HINT2Q9BX68 163 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 HRH4Q9H3N8 390 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 PATZ1Q9HBE1 687 aaKnown RBP10.24□□□□□ -0.77
CLCN6-206ENST00000376496 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 CSMD1Q96PZ7 3565 aa10.24□□□□□ -0.77
CLCN6-206ENST00000376496 PIGBOS1A0A0B4J2F0 54 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 MFSD2BA6NFX1 497 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLCN6-206ENST00000376496 MMP9P14780 707 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 ZFP36P26651 326 aaKnown RBP10.23□□□□□ -0.77
CLCN6-206ENST00000376496 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-206ENST00000376496 PNKDQ8N490 385 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 RNF141Q8WVD5 230 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 SMIM8Q96KF7 97 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-206ENST00000376496 FAM212BQ9NTI7 297 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-206ENST00000376496 PFDN2Q9UHV9 154 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 H0YJW9 148 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 AGPAT2O15120 278 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 FGF16O43320 207 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 ATP6V0CP27449 155 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 EFNA4P52798 201 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 BPESC1Q9GZL8 116 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 NUP50Q9UKX7 468 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 SHOXO15266 292 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 IGHV4-39P01824 125 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 LCN2P80188 198 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 TMEM30BQ3MIR4 351 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 Q8N7P7 452 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 ST6GALNAC6Q969X2 333 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 GINS3Q9BRX5 216 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 ARV1Q9H2C2 271 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
CLCN6-206ENST00000376496 KIR2DS2P43631 304 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 LDLRAD2Q5SZI1 272 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 NABP2Q9BQ15 211 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 LPAR2Q9HBW0 351 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 LOC105371242A0A075B767 164 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 FAM90A26D6RGX4 464 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 ENSAO43768 121 aaKnown RBP10.22□□□□□ -0.77
CLCN6-206ENST00000376496 EIF3GO75821 320 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLCN6-206ENST00000376496 EIF5AP63241 154 aaKnown RBP10.22□□□□□ -0.77
CLCN6-206ENST00000376496 SRSF3P84103 164 aaKnown RBP10.22□□□□□ -0.77
CLCN6-206ENST00000376496 RTL8BQ17RB0 113 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 PXDC1Q5TGL8 231 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 Q6ZRG5 221 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 TGIF2LXQ8IUE1 241 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 RAB39BQ96DA2 213 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 ADTRPQ96IZ2 230 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 ATP5SQ99766 215 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 RSG1Q9BU20 258 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 TMEM231Q9H6L2 316 aa10.22□□□□□ -0.77
CLCN6-206ENST00000376496 LIPFP07098 398 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 SAA1P0DJI8 122 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-206ENST00000376496 SPP1P10451 314 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 COL8A1P27658 744 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 SLC25A24Q6NUK1 477 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 LILRB2Q8N423 598 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 FAM216AQ8WUB2 273 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 HARBI1Q96MB7 349 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 LINC00052Q96N35 136 aa10.21□□□□□ -0.77
CLCN6-206ENST00000376496 A0A087X0M5 115 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 A0A1B0GX30 115 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 BAXQ07812 192 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 THNSL2Q86YJ6 484 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 OR2G3Q8NGZ4 309 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 CLEC7AQ9BXN2 247 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 MMP26Q9NRE1 261 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 TCF19Q9Y242 345 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 FBXO7Q9Y3I1 522 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 FBN2P35556 2912 aa10.21□□□□□ -0.78
CLCN6-206ENST00000376496 UBE2L5PA0A1B0GUS4 154 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 OVOL3O00110 214 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 GPR37O15354 613 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 FSTL3O95633 263 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 PRH1P02810 166 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 SULT1A2P50226 295 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 SLC38A11Q08AI6 406 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 ZNF616Q08AN1 781 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 TMEM14EPQ6UXP3 125 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 LY6G5BQ8NDX9 201 aa10.2□□□□□ -0.78
CLCN6-206ENST00000376496 OR5AN1Q8NGI8 311 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms