RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 KRASP01116 189 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 IGHV1-69P01742 117 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 C1QBP02746 253 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 RRASP10301 218 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 SAA4P35542 130 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 RAB13P51153 203 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 IL15RAQ13261 267 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 MIDNQ504T8 468 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 PDPNQ86YL7 162 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 FAM219AQ8IW50 185 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 OR8H3Q8N146 312 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 DYNAPQ8N1N2 210 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 CIARTQ8N365 385 aaPredicted RBP8.44□□□□□ -1.06
PDPN-203ENST00000376061 PPP1R1CQ8WVI7 109 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 C17orf50Q8WW18 174 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 GPR146Q96CH1 333 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 RRNAD1Q96FB5 475 aaKnown RBP8.44□□□□□ -1.06
PDPN-203ENST00000376061 AJUBAQ96IF1 538 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 RANBP3Q9H6Z4 567 aaPredicted RBP8.44□□□□□ -1.06
PDPN-203ENST00000376061 HILPDAQ9Y5L2 63 aa8.44□□□□□ -1.06
PDPN-203ENST00000376061 IGHV3OR16-10A0A075B7F0 116 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 OOSP1A8MZH6 123 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 TIMM23O14925 209 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 ATG12O94817 140 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 TGFAP01135 160 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 IGHV4-38-2P0DP08 117 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 SLC25A6P12236 298 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 NQO2P16083 231 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 PAX6P26367 422 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 LGALS4P56470 323 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 ERVK-16P61578 105 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 CYCSP99999 105 aaKnown RBP8.43□□□□□ -1.06
PDPN-203ENST00000376061 HABP2Q14520 560 aaPredicted RBP8.43□□□□□ -1.06
PDPN-203ENST00000376061 SMCO1Q147U7 214 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 POU2AF1Q16633 256 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 LRRC37A5PQ49AS3 106 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 TMEM177Q53S58 311 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 RUSC1-AS1Q66K80 236 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 THOC7Q6I9Y2 204 aaKnown RBP8.43□□□□□ -1.06
PDPN-203ENST00000376061 Q6ZRM9 215 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 MOB3BQ86TA1 216 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 VKORC1L1Q8N0U8 176 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 OR4D5Q8NGN0 318 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 OSR1Q8TAX0 266 aaPredicted RBP8.43□□□□□ -1.06
PDPN-203ENST00000376061 CFHR4Q92496 578 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 GSKIPQ9P0R6 139 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 CACNG5Q9UF02 275 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 PFDN2Q9UHV9 154 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 MYO9AB2RTY4 2548 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 AKAP9Q99996 3911 aa8.43□□□□□ -1.06
PDPN-203ENST00000376061 ABCA1O95477 2261 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 A0A1B0GU03 582 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 PITX3O75364 302 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 HRASP01112 189 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 MC5RP33032 325 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 NKX2-5P52952 324 aaPredicted RBP8.42□□□□□ -1.06
PDPN-203ENST00000376061 RAB32Q13637 225 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 SSX2Q16385 188 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 KLF17Q5JT82 389 aaPredicted RBP8.42□□□□□ -1.06
PDPN-203ENST00000376061 GPR157Q5UAW9 335 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 SSX9Q7RTT3 188 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 H2BFWTQ7Z2G1 175 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 OR11H4Q8NGC9 324 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 RHOVQ96L33 236 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 HARBI1Q96MB7 349 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 TMEM140Q9NV12 185 aa8.42□□□□□ -1.06
PDPN-203ENST00000376061 TET2Q6N021 2002 aaPredicted RBP8.42□□□□□ -1.06
PDPN-203ENST00000376061 SRRM4A7MD48 611 aaKnown RBP8.41□□□□□ -1.06
PDPN-203ENST00000376061 SHOXO15266 292 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 VENTXO95231 258 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 MPC2O95563 127 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 MBPP02686 304 aaPredicted RBP8.41□□□□□ -1.06
PDPN-203ENST00000376061 OR9G9P0C7N8 305 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 PSMB6P28072 239 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 EIF2B2P49770 351 aaKnown RBP8.41□□□□□ -1.06
PDPN-203ENST00000376061 S100A10P60903 97 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 CYB5R2Q6BCY4 276 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 OR4A47Q6IF82 309 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 CCDC144NLQ6NUI1 221 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 CFAP161Q6P656 301 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 BRD3OSQ6XYD6 125 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 NOXA1Q86UR1 476 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 OR4C13Q8NGP0 309 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 OR1S1Q8NH92 325 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 GRPEL2Q8TAA5 225 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 FLYWCH2Q96CP2 140 aaKnown RBP8.41□□□□□ -1.06
PDPN-203ENST00000376061 MALSU1Q96EH3 234 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 MS4A7Q9GZW8 240 aaPredicted RBP8.41□□□□□ -1.06
PDPN-203ENST00000376061 COA4Q9NYJ1 87 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 MBD2Q9UBB5 411 aa8.41□□□□□ -1.06
PDPN-203ENST00000376061 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 FXYD6-FXYD2A0A087WZ82 144 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 FAM90A9PA6NNJ1 464 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 H0YIZ8 118 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 K7EPK0 472 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 NXPH3O95157 252 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 FSHBP01225 129 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 IGLV2-23P01705 113 aa8.4□□□□□ -1.06
PDPN-203ENST00000376061 SAA1P0DJI8 122 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms