RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 HSPB1P04792 205 aaKnown RBP9.99□□□□□ -0.81
HMGCL-202ENST00000374487 RAB7AP51149 207 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 ERVK-16P61578 105 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 CCL8P80075 99 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 HNF4GQ14541 408 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 OR4A16Q8NH70 328 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 LEAP2Q969E1 77 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 SDSLQ96GA7 329 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 CCL13Q99616 98 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 NCOR1P1Q9H4R4 102 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 ZNF665Q9H7R5 613 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 CSMD2Q7Z408 3487 aa9.99□□□□□ -0.81
HMGCL-202ENST00000374487 KBTBD11-OT1A0A1B0GTJ5 212 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 GYPAP02724 150 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 CRYBA1P05813 215 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 SRP19P09132 144 aaKnown RBP9.98□□□□□ -0.81
HMGCL-202ENST00000374487 OR4A8P0C604 315 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 DAOP14920 347 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 OR2B8PP59922 312 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 ICAM4Q14773 271 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 KHDC3LQ587J8 217 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 STUMQ69YW2 141 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 TMEM147Q9BVK8 224 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 QTRT1Q9BXR0 403 aaKnown RBP9.98□□□□□ -0.81
HMGCL-202ENST00000374487 IFI27L2Q9H2X8 130 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 USF3Q68DE3 2245 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 ZFP92A6NM28 416 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 FBP1P09467 338 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 TNFRSF1AP19438 455 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 RPS16P62249 146 aaKnown RBP9.98□□□□□ -0.81
HMGCL-202ENST00000374487 BSPH1Q075Z2 132 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 C17orf58Q2M2W7 97 aa9.98□□□□□ -0.81
HMGCL-202ENST00000374487 DUX4L9Q6RFH8 374 aaPredicted RBP9.98□□□□□ -0.81
HMGCL-202ENST00000374487 RCC1LQ96I51 464 aaKnown RBP9.98□□□□□ -0.81
HMGCL-202ENST00000374487 SAV1Q9H4B6 383 aaPredicted RBP9.98□□□□□ -0.81
HMGCL-202ENST00000374487 A0A1W2PPE3 182 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 DPRXA6NFQ7 191 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 H3BQ15 152 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 RBFOX2O43251 390 aaKnown RBP eCLIP9.97□□□□□ -0.81
HMGCL-202ENST00000374487 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CGB3P0DN86 165 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CGB7P0DN87 165 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 AGAP20933 346 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 PAX6P26367 422 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 FGF8P55075 233 aaPredicted RBP9.97□□□□□ -0.81
HMGCL-202ENST00000374487 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CYB561D1Q8N8Q1 229 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 ZNF709Q8N972 641 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 Q8TCH9 128 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 ISOC2Q96AB3 205 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 GAFA1Q96PS6 74 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 GFOD1Q9NXC2 390 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 TIMM9Q9Y5J7 89 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CSMD1Q96PZ7 3565 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CENPEQ02224 2701 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 FAM90A9PA6NNJ1 464 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 VSTM5A8MXK1 200 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 SLC31A2O15432 143 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 NQO2P16083 231 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 FGF7P21781 194 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 KIR2DS2P43631 304 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 ADIPOQQ15848 244 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 ZNF726P1Q15940 193 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CT45A1Q5HYN5 189 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 ZNF429Q86V71 674 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 CT45A3Q8NHU0 189 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 DIRC2Q96SL1 478 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 NIPSNAP3BQ9BS92 247 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 TUBA4BQ9H853 241 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 SLC39A9Q9NUM3 307 aa9.97□□□□□ -0.81
HMGCL-202ENST00000374487 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 ITGB1BP1O14713 200 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 TMPRSS2O15393 492 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 LY86O95711 162 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 MT-ND4LP03901 98 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 RAB13P51153 203 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 RPP30P78346 268 aaKnown RBP9.96□□□□□ -0.82
HMGCL-202ENST00000374487 ZNF788Q6ZQV5 615 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 TGIF2LYQ8IUE0 185 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 LYG1Q8N1E2 194 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 OR4S2Q8NH73 311 aa9.96□□□□□ -0.82
HMGCL-202ENST00000374487 KLF2Q9Y5W3 355 aaPredicted RBP9.96□□□□□ -0.82
HMGCL-202ENST00000374487 HCFC1P51610 2035 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 PMS2P5A8MQ11 134 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 C17orf100A8MU93 164 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 IFNA10P01566 189 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 MBP02144 154 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 ARG1P05089 322 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 BCL2P10415 239 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 NDUFB7P17568 137 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 SPCS3P61009 180 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 RAB11AP62491 216 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 GNB2P62879 340 aa9.95□□□□□ -0.82
HMGCL-202ENST00000374487 UTF1Q5T230 341 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms