RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PCNX1Q96RV3 2341 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 HELZ2Q9BYK8 2649 aaKnown RBP9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 ZNF705GA8MUZ8 300 aaPredicted RBP9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 H3BP45 60 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 TMPRSS2O15393 492 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 IGKV1-39P01597 117 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 IGKV1D-39P04432 117 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 CNN1P51911 297 aaKnown RBP9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 TNFRSF9Q07011 255 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 Q6ZRM9 215 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 RPP25LQ8N5L8 163 aaKnown RBP9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 OR56B2PQ8NGI1 322 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 APOBEC3DQ96AK3 386 aaPredicted RBP9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 NEIL1Q96FI4 390 aaPredicted RBP9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 TXNDC17Q9BRA2 123 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 TMEM147Q9BVK8 224 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 PKIBQ9C010 78 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 MTCH1Q9NZJ7 389 aa9.58□□□□□ -0.88
TSPAN1-201ENST00000372003 GCN1Q92616 2671 aaKnown RBP9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 USP9XQ93008 2570 aaPredicted RBP9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 OR5B21A6NL26 309 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 TMEM210A6NLX4 147 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 NXPH3O95157 252 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 IGKV1-5P01602 117 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 GYPAP02724 150 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 OR10J1P30954 320 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 PAX5Q02548 391 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 FOXL1Q12952 345 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 MSMO1Q15800 293 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 HIST2H2BCQ6DN03 193 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 MRPL21Q7Z2W9 205 aaKnown RBP9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 ZNF573Q86YE8 665 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 OR1K1Q8NGR3 316 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 PCGF1Q9BSM1 259 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 CRIM1Q9NZV1 1036 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 MPC1Q9Y5U8 109 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
TSPAN1-201ENST00000372003 TRAV9-1A0A075B6T8 112 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 MLNRO43193 412 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 TNFSF12O43508 249 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 PDE6DO43924 150 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 CD55P08174 381 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 HOXC12P31275 282 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 UBE2NP61088 152 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 ERVS71-1P61550 626 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 WFDC8Q8IUA0 241 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 MRPL41Q8IXM3 137 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 TCTEX1D1Q8N7M0 179 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 OR51H1Q8NH63 302 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 FGFBP3Q8TAT2 258 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 BCL2L2Q92843 193 aaPredicted RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 DIRC2Q96SL1 478 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 FGF23Q9GZV9 251 aaPredicted RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 FKBP11Q9NYL4 201 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 HSPB7Q9UBY9 170 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 INTS1Q8N201 2190 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 FASNP49327 2511 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 C17orf112F2Z3M2 114 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 F6UZH7 168 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 PATE4P0C8F1 98 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 IAPPP10997 89 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 TUBG1P23258 451 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 GPM6AP51674 278 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 RPL15P61313 204 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 GAGE1Q13065 139 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 ZNF585BQ52M93 769 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 SPANXN5Q5MJ07 72 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 WDR31Q8NA23 367 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 CPEB3Q8NE35 698 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 C1orf162Q8NEQ5 155 aaPredicted RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 OR10G9Q8NGN4 311 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 OR10G7Q8NGN6 311 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 RAB1CQ92928 201 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 RPUSD4Q96CM3 377 aaKnown RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 CIB3Q96Q77 187 aaPredicted RBP9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 FUT9Q9Y231 359 aa9.56□□□□□ -0.88
TSPAN1-201ENST00000372003 ARID1AO14497 2285 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 TRAV24A0A0B4J272 114 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 UBE2L5PA0A1B0GUS4 154 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 IGKV1D-33P01593 117 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 IGKV1-33P01594 117 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 THBDP07204 575 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 SNRPCP09234 159 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 COX6B1P14854 86 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 IGFBP2P18065 325 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 MDKP21741 143 aaPredicted RBP9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 ELLP55199 621 aaPredicted RBP9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 PRSS12P56730 875 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 RANP62826 216 aaKnown RBP9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 GNG3P63215 75 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 PAFAH1B2P68402 229 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 RELQ04864 619 aaPredicted RBP9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 ACSM6Q6P461 480 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 FAM58AQ8N1B3 248 aa9.55□□□□□ -0.88
TSPAN1-201ENST00000372003 OR4F5Q8NH21 305 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms