RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ZNF471Q9BX82 626 aaPredicted RBP21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 SLC25A31Q9H0C2 315 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 IGHV4-30-2A0A087WSY4 118 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 IGHV4-61A0A0C4DH41 118 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 CAV2P51636 162 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 RPL23AP62750 156 aaKnown RBP21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 MMP26Q9NRE1 261 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 WASHC3Q9Y3C0 194 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 WSB1Q9Y6I7 421 aa21.34■■□□□ 1.01
ATPAF1-202ENST00000371937 ARG1P05089 322 aa21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 OR9G9P0C7N8 305 aa21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 UBE2KP61086 200 aa21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 UBA52P62987 128 aaKnown RBP21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 VMO1Q7Z5L0 202 aa21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 OR4C13Q8NGP0 309 aa21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 FLYWCH2Q96CP2 140 aaKnown RBP21.33■■□□□ 1.01
ATPAF1-202ENST00000371937 HTR1DP28221 377 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 AARDQ4LEZ3 155 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 TMEM177Q53S58 311 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 RPEQ96AT9 228 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 PSMG3-AS1Q96PY0 264 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 SIRPDQ9H106 197 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 INSIG2Q9Y5U4 225 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 SHOXO15266 292 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 TMEM50AO95807 157 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 TAS2R30P59541 319 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 OR4A47Q6IF82 309 aa21.32■■□□□ 1
ATPAF1-202ENST00000371937 LEUTXA8MZ59 168 aa21.31■■□□□ 1
ATPAF1-202ENST00000371937 LY6LH3BQJ8 138 aa21.31■■□□□ 1
ATPAF1-202ENST00000371937 SPDEFO95238 335 aa21.31■■□□□ 1
ATPAF1-202ENST00000371937 CFDP00746 253 aaPredicted RBP21.31■■□□□ 1
ATPAF1-202ENST00000371937 CEACAM3P40198 252 aa21.31■■□□□ 1
ATPAF1-202ENST00000371937 PAX9P55771 341 aa21.31■■□□□ 1
ATPAF1-202ENST00000371937 EXOSC2Q13868 293 aaKnown RBP21.31■■□□□ 1
ATPAF1-202ENST00000371937 SMIM8Q96KF7 97 aa21.31■■□□□ 1
ATPAF1-202ENST00000371937 FAM24AA6NFZ4 105 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 ODF3BA8MYP8 253 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 FAM157AC9JC47 383 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 SLC25A16P16260 332 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 DVL1P1P54792 670 aaPredicted RBP21.3■■□□□ 1
ATPAF1-202ENST00000371937 KRTAP10-9P60411 292 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 RELBQ01201 579 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 HCP5Q6MZN7 132 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 ST8SIA2Q92186 375 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 RBKSQ9H477 322 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 BEX4Q9NWD9 120 aaPredicted RBP21.3■■□□□ 1
ATPAF1-202ENST00000371937 DPM3Q9P2X0 92 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 UBQLN2Q9UHD9 624 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 CENPEQ02224 2701 aa21.3■■□□□ 1
ATPAF1-202ENST00000371937 TOX4O94842 621 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 EWSR1Q01844 656 aaKnown RBP eCLIP21.29■■□□□ 1
ATPAF1-202ENST00000371937 CLEC12BQ2HXU8 276 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 TMEM252Q8N6L7 170 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 HARBI1Q96MB7 349 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 IGHV1-3A0A0C4DH29 117 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 KLRD1Q13241 179 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 ZNF429Q86V71 674 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 OR52E5Q8NH55 327 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 STOML3Q8TAV4 291 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 QTRT1Q9BXR0 403 aaKnown RBP21.29■■□□□ 1
ATPAF1-202ENST00000371937 CYTL1Q9NRR1 136 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 PSENENQ9NZ42 101 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 FBXL17Q9UF56 701 aa21.29■■□□□ 1
ATPAF1-202ENST00000371937 IAPPP10997 89 aa21.28■■□□□ 1
ATPAF1-202ENST00000371937 OR2B8PP59922 312 aa21.28■■□□□ 1
ATPAF1-202ENST00000371937 BAXQ07812 192 aa21.28■■□□□ 1
ATPAF1-202ENST00000371937 CIB3Q96Q77 187 aaPredicted RBP21.28■■□□□ 1
ATPAF1-202ENST00000371937 FBN2P35556 2912 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 IGSF23A1L1A6 192 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 SRRM4A7MD48 611 aaKnown RBP21.27■■□□□ 1
ATPAF1-202ENST00000371937 LY86O95711 162 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 IFNA17P01571 189 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 TPT1P13693 172 aaKnown RBP21.27■■□□□ 1
ATPAF1-202ENST00000371937 SPCS3P61009 180 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 EIF5AP63241 154 aaKnown RBP21.27■■□□□ 1
ATPAF1-202ENST00000371937 NHLH2Q02577 135 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 TPTE2P1Q5T6R2 138 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 MOB3BQ86TA1 216 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 MS4A7Q9GZW8 240 aaPredicted RBP21.27■■□□□ 1
ATPAF1-202ENST00000371937 ASH1LQ9NR48 2969 aaKnown RBP21.27■■□□□ 1
ATPAF1-202ENST00000371937 BET1LQ9NYM9 111 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 CELSR2Q9HCU4 2923 aa21.27■■□□□ 1
ATPAF1-202ENST00000371937 C15orf61A6NNL5 157 aa21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 IL6RP08887 468 aaPredicted RBP21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 HOXB4P17483 251 aaPredicted RBP21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 RPS16P62249 146 aaKnown RBP21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 STX12Q86Y82 276 aa21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 DTD1Q8TEA8 209 aa21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 LPAR2Q9HBW0 351 aa21.27■□□□□ 0.99
ATPAF1-202ENST00000371937 TRAV3A0A0B4J244 114 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 CEBPZOSA8MTT3 80 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 RNASEK-C17orf49H0YIS7 233 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 PDLIM3Q53GG5 364 aaPredicted RBP21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 LRRC75A-AS1Q8N1F1 130 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 VSTM2AQ8TAG5 236 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 PHYHIPLQ96FC7 376 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 NUP50Q9UKX7 468 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 PRNDQ9UKY0 176 aa21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 FOXA2Q9Y261 457 aaPredicted RBP21.26■□□□□ 0.99
ATPAF1-202ENST00000371937 PTPN13Q12923 2485 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms