RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 BTF3L4Q96K17 158 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 FAM210BQ96KR6 192 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 KMT2CQ8NEZ4 4911 aaKnown RBP12.3□□□□□ -0.44
LMO4-201ENST00000370542 H0YL77 283 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 CYB5R3P00387 301 aaPredicted RBP12.3□□□□□ -0.44
LMO4-201ENST00000370542 IGLV3-1P01715 115 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 PIGPP57054 158 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 RND3P61587 244 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 VAMP2P63027 116 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 KISS1Q15726 138 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 OR8B12Q8NGG6 310 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 OR4D5Q8NGN0 318 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 Q8TCH9 128 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 Q8WTZ3 238 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
LMO4-201ENST00000370542 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 PRR13Q9NZ81 148 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 AK3Q9UIJ7 227 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 RCL1Q9Y2P8 373 aaKnown RBP12.3□□□□□ -0.44
LMO4-201ENST00000370542 V9GYS6 101 aa12.3□□□□□ -0.44
LMO4-201ENST00000370542 VWFP04275 2813 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 A0A1B0GV90 55 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 CYB5BO43169 146 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 IFNA1P01562 189 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 SELEP16581 610 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 PRTN3P24158 256 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 OTX1P32242 354 aaPredicted RBP12.29□□□□□ -0.44
LMO4-201ENST00000370542 PPP1CCP36873 323 aaKnown RBP12.29□□□□□ -0.44
LMO4-201ENST00000370542 ZNF121P58317 390 aaPredicted RBP12.29□□□□□ -0.44
LMO4-201ENST00000370542 NHLH2Q02577 135 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 PMS2P11Q13670 270 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
LMO4-201ENST00000370542 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 TMEM183AQ8IXX5 376 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 OR10AD1Q8NGE0 317 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 OR10S1Q8NGN2 331 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 SPSB1Q96BD6 273 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 ACY3Q96HD9 319 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 PACRGQ96M98 296 aaPredicted RBP12.29□□□□□ -0.44
LMO4-201ENST00000370542 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
LMO4-201ENST00000370542 NDUFAF3Q9BU61 184 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 ZNF286AQ9HBT8 521 aa12.29□□□□□ -0.44
LMO4-201ENST00000370542 DHRS3O75911 302 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 SELLP14151 372 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 ATP6V0CP27449 155 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 CD200P41217 278 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 IL24Q13007 206 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 ICAM4Q14773 271 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 H1FOOQ8IZA3 346 aaPredicted RBP12.28□□□□□ -0.44
LMO4-201ENST00000370542 SIGLECL1Q8N7X8 197 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 C22orf15Q8WYQ4 148 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 PGAM5Q96HS1 289 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 SSBP3Q9BWW4 388 aaPredicted RBP12.28□□□□□ -0.44
LMO4-201ENST00000370542 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 MMP24Q9Y5R2 645 aa12.28□□□□□ -0.44
LMO4-201ENST00000370542 IGHV2-70DA0A0C4DH43 119 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 LOC102723971A0A1B0GUV8 181 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 ZNF850A8MQ14 1090 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 TRDCB7Z8K6 153 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 CXCL1P09341 107 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 TRGC1P0CF51 173 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.45
LMO4-201ENST00000370542 HERV-K104P61576 105 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 FOXL1Q12952 345 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 GAMTQ14353 236 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
LMO4-201ENST00000370542 ZNF841Q6ZN19 808 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 BCL6BQ8N143 479 aaPredicted RBP12.27□□□□□ -0.45
LMO4-201ENST00000370542 IL22RA2Q969J5 263 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 MOB3AQ96BX8 217 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 FAM71F1Q96KD3 344 aaPredicted RBP12.27□□□□□ -0.45
LMO4-201ENST00000370542 Q96M66 194 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 GPR61Q9BZJ8 451 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 SRD5A3Q9H8P0 318 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.45
LMO4-201ENST00000370542 KIR2DS1A0A191URI9 304 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 LRRC30A6NM36 301 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 PPP5D1E7EU14 171 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 M0QZK8 103 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 TNFRSF13BO14836 293 aaPredicted RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 GEMIN2O14893 280 aaKnown RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 GGCTO75223 188 aaKnown RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 LY86O95711 162 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 TRGC2P03986 189 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 RNASE1P07998 156 aaKnown RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 TMEM225BP0DP42 221 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 RPL23AP62750 156 aaKnown RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 RELQ04864 619 aaPredicted RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 CNN3Q15417 329 aaKnown RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 SLC25A26Q70HW3 274 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 MOGAT3Q86VF5 341 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 NEIL1Q96FI4 390 aaPredicted RBP12.26□□□□□ -0.45
LMO4-201ENST00000370542 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 NEU1Q99519 415 aa12.26□□□□□ -0.45
LMO4-201ENST00000370542 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms