RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 HARBI1Q96MB7 349 aa8.8□□□□□ -1
BRCC3-204ENST00000369462 MGAT4CQ9UBM8 478 aa8.8□□□□□ -1
BRCC3-204ENST00000369462 MARCH11A6NNE9 402 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 SRRM4A7MD48 611 aaKnown RBP8.79□□□□□ -1
BRCC3-204ENST00000369462 MPTX1A8MV57 137 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 FAM25EA8MYX2 175 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 GOSR2O14653 212 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 SIX6O95475 246 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 IGKV1-5P01602 117 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 SNRNP70P08621 437 aaKnown RBP8.79□□□□□ -1
BRCC3-204ENST00000369462 FOSL1P15407 271 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 NQO2P16083 231 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 SRP14P37108 136 aaKnown RBP8.79□□□□□ -1
BRCC3-204ENST00000369462 IZUMO4Q1ZYL8 232 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 TEX29Q8N6K0 151 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 DMBX1Q8NFW5 382 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 RRNAD1Q96FB5 475 aaKnown RBP8.79□□□□□ -1
BRCC3-204ENST00000369462 SEC22AQ96IW7 307 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 MEGF9Q9H1U4 602 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 C13orf42A0A1B0GVH6 325 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 MDFIC2A0A1B0GVS7 189 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 IFNA21P01568 189 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 VDAC1P21796 283 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 DEFB112Q30KQ8 113 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 TMEM177Q53S58 311 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 GGNBP1Q5YKI7 109 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 CLEC9AQ6UXN8 241 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 Q71RC1 249 aaPredicted RBP8.79□□□□□ -1
BRCC3-204ENST00000369462 OR11H7Q8NGC8 314 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 OSR1Q8TAX0 266 aaPredicted RBP8.79□□□□□ -1
BRCC3-204ENST00000369462 RAB18Q9NP72 206 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 COMMD9Q9P000 198 aa8.79□□□□□ -1
BRCC3-204ENST00000369462 HMX3A6NHT5 357 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 HRASP01112 189 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 SULT1A3P0DMM9 295 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 SULT1A4P0DMN0 295 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 FBLN7Q53RD9 439 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 SSX3Q99909 188 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 TMED3Q9Y3Q3 217 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 PIGBOS1A0A0B4J2F0 54 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 A0A0G2JRQ6 117 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 C5orf51A6NDU8 294 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 MOSP00540 346 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 FAM106CPP0CH98 169 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 HNF1AP20823 631 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 H2BFSP57053 126 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 ERVK-16P61578 105 aa8.78□□□□□ -1
BRCC3-204ENST00000369462 DUXBA0A1W2PPF3 345 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 FAM90A9PA6NNJ1 464 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 ATG12O94817 140 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 CNTFRP26992 372 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 NMSQ5H8A3 153 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 C9orf139Q6ZV77 190 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 H2BFWTQ7Z2G1 175 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 OR5M8Q8NGP6 311 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 OR2T10Q8NGZ9 312 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 OR10C1Q96KK4 312 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 CHIAQ9BZP6 476 aa8.77□□□□□ -1
BRCC3-204ENST00000369462 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1
BRCC3-204ENST00000369462 TNCP24821 2201 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 HLA-GP17693 338 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 LGALS7P47929 136 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 GSG1LQ6UXU4 331 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 Q6ZRM9 215 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 CHAC2Q8WUX2 184 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 LSM10Q969L4 123 aaKnown RBP8.77□□□□□ -1.01
BRCC3-204ENST00000369462 GPR146Q96CH1 333 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 PDCD10Q9BUL8 212 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 TMEM140Q9NV12 185 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 MMP24Q9Y5R2 645 aa8.77□□□□□ -1.01
BRCC3-204ENST00000369462 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
BRCC3-204ENST00000369462 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1.01
BRCC3-204ENST00000369462 H3BUX3 64 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 SLC25A17O43808 307 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 SAA1P0DJI8 122 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 TMEM11P17152 192 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 F2RL1P55085 397 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 CD83Q01151 205 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 MMDQ15546 238 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 IAH1Q2TAA2 248 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 LRRC75BQ2VPJ9 315 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 OR4A47Q6IF82 309 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 PIFOQ8TCI5 191 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 AIFM2Q9BRQ8 373 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 GSKIPQ9P0R6 139 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 NSG2Q9Y328 171 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 IGLV2-23P01705 113 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 DYNLT3P51808 116 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 EBI3Q14213 229 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 POU2AF1Q16633 256 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 WDR89Q96FK6 387 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 TSNAXQ99598 290 aaKnown RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 TMEM160Q9NX00 188 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 CACNG5Q9UF02 275 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 P0C879 139 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 FAM219AQ8IW50 185 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 ZNF48Q96MX3 618 aaPredicted RBP8.76□□□□□ -1.01
BRCC3-204ENST00000369462 RNF5Q99942 180 aa8.76□□□□□ -1.01
BRCC3-204ENST00000369462 ZNF436Q9C0F3 470 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms