RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SSX9Q7RTT3 188 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 PDZD9Q8IXQ8 264 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 VKORC1L1Q8N0U8 176 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 TMEM140Q9NV12 185 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 A0A1W2PPI3 338 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 NXPH3O95157 252 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 UBE2E1P51965 193 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 LHFPL4Q7Z7J7 247 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 LHX4Q969G2 390 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 RHOVQ96L33 236 aa19.3■□□□□ 0.68
SNX3-203ENST00000368979 ANKRD17O75179 2603 aaKnown RBP19.29■□□□□ 0.68
SNX3-203ENST00000368979 FAM90A26D6RGX4 464 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 E5RGE8 158 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 OR2F2O95006 317 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 OR2F1Q13607 317 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 MINOS1Q5TGZ0 78 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 ACOT7LQ6ZUV0 252 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 FLYWCH2Q96CP2 140 aaKnown RBP19.29■□□□□ 0.68
SNX3-203ENST00000368979 MAGT1Q9H0U3 335 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.29■□□□□ 0.68
SNX3-203ENST00000368979 NSG2Q9Y328 171 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 MINOS1-NBL1R4GNA1 71 aa19.29■□□□□ 0.68
SNX3-203ENST00000368979 A0A1W2PRD5 423 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 A0A1W2PRF3 423 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 A0A1W2PRM7 423 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 SRRM4A7MD48 611 aaKnown RBP19.28■□□□□ 0.68
SNX3-203ENST00000368979 KCNAB3O43448 404 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 AARDQ4LEZ3 155 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 OR4A47Q6IF82 309 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 TMUB2Q71RG4 321 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 KCNRGQ8N5I3 272 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 INO80EQ8NBZ0 244 aaPredicted RBP19.28■□□□□ 0.68
SNX3-203ENST00000368979 OR4C13Q8NGP0 309 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 AQP10Q96PS8 301 aa19.28■□□□□ 0.68
SNX3-203ENST00000368979 MSGN1A6NI15 193 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 SHOXO15266 292 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 IL6RP08887 468 aaPredicted RBP19.27■□□□□ 0.68
SNX3-203ENST00000368979 RELBQ01201 579 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 OR8H3Q8N146 312 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 HARBI1Q96MB7 349 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 AIFM2Q9BRQ8 373 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 REG4Q9BYZ8 158 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 HSPB7Q9UBY9 170 aa19.27■□□□□ 0.68
SNX3-203ENST00000368979 TBL2Q9Y4P3 447 aaKnown RBP19.27■□□□□ 0.68
SNX3-203ENST00000368979 IGHV3-72A0A0B4J1Y9 119 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 TRAV20A0A0B4J274 112 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 A0A0D9SG52 128 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 RNF223E7ERA6 249 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 SSSCA1O60232 199 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 S100A11P31949 105 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 AP2S1P53680 142 aaPredicted RBP19.26■□□□□ 0.67
SNX3-203ENST00000368979 MOB3BQ86TA1 216 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 LINC01356Q8N9X3 169 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 CSMD2Q7Z408 3487 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 CENPEQ02224 2701 aa19.26■□□□□ 0.67
SNX3-203ENST00000368979 OOSP1A8MZH6 123 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 WRBO00258 174 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 HKR1P10072 659 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 PVALBP20472 110 aaPredicted RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 P2RY1P47900 373 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 TNFRSF9Q07011 255 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 HABP2Q14520 560 aaPredicted RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 OPCMLQ14982 345 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 Q96MF0 132 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 ARL6Q9H0F7 186 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 HILPDAQ9Y5L2 63 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 TRAV3A0A0B4J244 114 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 SYNGR2O43760 224 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 CHST1O43916 411 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 SAA1P0DJI8 122 aaPredicted RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 C4BPBP20851 252 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 NUP62P37198 522 aaPredicted RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 LGALS4P56470 323 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 OR2B8PP59922 312 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 IFITM2Q01629 132 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 PUSL1Q8N0Z8 303 aaKnown RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 OR4A16Q8NH70 328 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 CFHR4Q92496 578 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 QTRT1Q9BXR0 403 aaKnown RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 MS4A7Q9GZW8 240 aaPredicted RBP19.25■□□□□ 0.67
SNX3-203ENST00000368979 BET1LQ9NYM9 111 aa19.25■□□□□ 0.67
SNX3-203ENST00000368979 APCP25054 2843 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 CENPVL3A0A0U1RRI6 287 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 TIMM23O14925 209 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 TMEM50AO95807 157 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 IGLV2-23P01705 113 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 GATA3P23771 443 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 RPS16P62249 146 aaKnown RBP19.24■□□□□ 0.67
SNX3-203ENST00000368979 RAB40CQ96S21 281 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 HIF1ANQ9NWT6 349 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 AUP1Q9Y679 476 aa19.24■□□□□ 0.67
SNX3-203ENST00000368979 POLQO75417 2590 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 C15orf61A6NNL5 157 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 RPL12P30050 165 aaKnown RBP19.23■□□□□ 0.67
SNX3-203ENST00000368979 PAX9P55771 341 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 UBE2KP61086 200 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 CCDC144NLQ6NUI1 221 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 ZNF429Q86V71 674 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 DYNAPQ8N1N2 210 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 AJUBAQ96IF1 538 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms