RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 POC5Q8NA72 575 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 OR5T1Q8NG75 326 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 SECTM1Q8WVN6 248 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 DPF1Q92782 380 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 TMEM68Q96MH6 324 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 ZNF430Q9H8G1 570 aaPredicted RBP14.64□□□□□ -0.07
CKS1B-203ENST00000368439 TAS2R8Q9NYW2 309 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 SCOCQ9UIL1 159 aa14.64□□□□□ -0.07
CKS1B-203ENST00000368439 IGHV4OR15-8A0A075B7B6 117 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 A0A087WW49 117 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 IGHV3-11P01762 117 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 TRGV3P03979 118 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 TPPP2P59282 170 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 DHRS11Q6UWP2 260 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 ZBTB34Q8NCN2 500 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 TCTEX1D2Q8WW35 142 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 ACOT12Q8WYK0 555 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 MRPS26Q9BYN8 205 aaKnown RBP14.63□□□□□ -0.07
CKS1B-203ENST00000368439 IFT46Q9NQC8 304 aa14.63□□□□□ -0.07
CKS1B-203ENST00000368439 MRPS7Q9Y2R9 242 aaKnown RBP14.63□□□□□ -0.07
CKS1B-203ENST00000368439 MSGN1A6NI15 193 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 SEC14L6B5MCN3 397 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 TNFSF12O43508 249 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 ELK1P19419 428 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 PRSS3P35030 304 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 RORCP51449 518 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 DYRK1AQ13627 763 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 TNXAQ16473 311 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 C9orf66Q5T8R8 295 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 GPR107Q5VW38 600 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 ZNF818PQ6ZRF7 136 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 LYSMD2Q8IV50 215 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 VKORC1L1Q8N0U8 176 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 PUSL1Q8N0Z8 303 aaKnown RBP14.62□□□□□ -0.07
CKS1B-203ENST00000368439 OR4S2Q8NH73 311 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 GPX8Q8TED1 209 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 SRSF12Q8WXF0 261 aaKnown RBP14.62□□□□□ -0.07
CKS1B-203ENST00000368439 DCUN1D4Q92564 292 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 DCUN1D5Q9BTE7 237 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 SLC5A7Q9GZV3 580 aa14.62□□□□□ -0.07
CKS1B-203ENST00000368439 LINC01619G3V211 115 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 HPGDSO60760 199 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 CD40LGP29965 261 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 RFX2P48378 723 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 SLURP1P55000 103 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 FXYD4P59646 89 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 MMD2Q8IY49 270 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 DLX4Q92988 240 aaPredicted RBP14.61□□□□□ -0.07
CKS1B-203ENST00000368439 TINAGL1Q9GZM7 467 aaPredicted RBP14.61□□□□□ -0.07
CKS1B-203ENST00000368439 EHFQ9NZC4 300 aa14.61□□□□□ -0.07
CKS1B-203ENST00000368439 RAMP3O60896 148 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 RBMXL2O75526 392 aaKnown RBP14.6□□□□□ -0.07
CKS1B-203ENST00000368439 KBTBD11O94819 623 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 PMP2P02689 132 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 HSPB1P04792 205 aaKnown RBP14.6□□□□□ -0.07
CKS1B-203ENST00000368439 APELAP0DMC3 54 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 GNRHRP30968 328 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 DGCR2P98153 550 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 C10orf55Q5SWW7 151 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 ADAD2Q8NCV1 583 aaKnown RBP14.6□□□□□ -0.07
CKS1B-203ENST00000368439 TMEM167AQ8TBQ9 72 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 ZNF355PQ9NSJ1 428 aa14.6□□□□□ -0.07
CKS1B-203ENST00000368439 OR2A4O95047 310 aa14.59□□□□□ -0.07
CKS1B-203ENST00000368439 ZNF182P17025 639 aaPredicted RBP14.59□□□□□ -0.07
CKS1B-203ENST00000368439 KIR2DS2P43631 304 aa14.59□□□□□ -0.07
CKS1B-203ENST00000368439 MOB3AQ96BX8 217 aa14.59□□□□□ -0.07
CKS1B-203ENST00000368439 OR2A7Q96R45 310 aa14.59□□□□□ -0.07
CKS1B-203ENST00000368439 ZNF2Q9BSG1 426 aaPredicted RBP14.59□□□□□ -0.07
CKS1B-203ENST00000368439 ADAM30Q9UKF2 790 aa14.59□□□□□ -0.07
CKS1B-203ENST00000368439 E7EUB6 86 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 SULT1C2O00338 296 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 OVOL1O14753 267 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 RBFOX2O43251 390 aaKnown RBP eCLIP14.58□□□□□ -0.08
CKS1B-203ENST00000368439 CREBL2O60519 120 aaPredicted RBP14.58□□□□□ -0.08
CKS1B-203ENST00000368439 OR9G9P0C7N8 305 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 TAS2R46P59540 309 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 DEFA5Q01523 94 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 GPR141Q7Z602 305 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 TMEM17Q86X19 198 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 SPAG16Q8N0X2 631 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 OR5H2Q8NGV7 314 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 PHB2Q99623 299 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 SCPEP1Q9HB40 452 aa14.58□□□□□ -0.08
CKS1B-203ENST00000368439 A0A0G2JLM5 398 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 SMIM31A0A1B0GVY4 71 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 A0A1B0GW64 132 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 TEX22C9J3V5 150 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 IL6RP08887 468 aaPredicted RBP14.57□□□□□ -0.08
CKS1B-203ENST00000368439 HRH1P35367 487 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 HERV-K104P61576 105 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 ZNF45Q02386 682 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 SNX29P2Q8IUI4 249 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 TTC9CQ8N5M4 171 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 VSTM2AQ8TAG5 236 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 FXYD6Q9H0Q3 95 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 COA4Q9NYJ1 87 aa14.57□□□□□ -0.08
CKS1B-203ENST00000368439 ZMAT5Q9UDW3 170 aaKnown RBP14.57□□□□□ -0.08
CKS1B-203ENST00000368439 COL7A1Q02388 2944 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 SORL1Q92673 2214 aa14.56□□□□□ -0.08
CKS1B-203ENST00000368439 C13orf42A0A1B0GVH6 325 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms