RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ARPC1AQ92747 370 aa17.51■□□□□ 0.39
ECHDC1-203ENST00000368291 A0A1W2PN81 502 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 ZNF701M0R085 212 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 CD3DP04234 171 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 TNFSF8P32971 234 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 CHRNA7P36544 502 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 AKIRIN2Q53H80 203 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 PYHIN1Q6K0P9 492 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 C8orf86Q6ZUL3 223 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 VKORC1L1Q8N0U8 176 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 KLHL30-AS1Q8NEE0 82 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 ABHD5Q8WTS1 349 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 SOSTQ9BQB4 213 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 TINAGL1Q9GZM7 467 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 NOTCH3Q9UM47 2321 aa17.5■□□□□ 0.39
ECHDC1-203ENST00000368291 CTDSPLO15194 276 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 KIR2DS2P43631 304 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 CDX1P47902 265 aaPredicted RBP17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 TSPAN5P62079 268 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 GNB1P62873 340 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 TMEM267Q0VDI3 215 aaPredicted RBP17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 IL18Q14116 193 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 PRSS8Q16651 343 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 ACTBL2Q562R1 376 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 AADACL3Q5VUY0 350 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 UNQ5815/PRO19632Q6UWF5 114 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 ZNF695Q8IW36 515 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 SPAG16Q8N0X2 631 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 TCTEX1D1Q8N7M0 179 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 GRPEL2Q8TAA5 225 aa17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 FOXA2Q9Y261 457 aaPredicted RBP17.49■□□□□ 0.39
ECHDC1-203ENST00000368291 RBFOX2O43251 390 aaKnown RBP eCLIP17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 PGLYRP1O75594 196 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 MRPS10P82664 201 aaKnown RBP17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 ASPHD1Q5U4P2 390 aa17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 PUSL1Q8N0Z8 303 aaKnown RBP17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 WFDC9Q8NEX5 89 aa17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 OR4D10Q8NGI6 311 aa17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 OR51H1Q8NH63 302 aa17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 SMIM4Q8WVI0 70 aa17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 BORCS5Q969J3 196 aa17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 ZNF430Q9H8G1 570 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-203ENST00000368291 NUDT19A8MXV4 375 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 CNIH1O95406 144 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 CD74P04233 296 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 SLC6A1P30531 599 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 RAB9AP51151 201 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 CATR1Q13166 79 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 ZNF491Q8N8L2 437 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 TMEM229BQ8NBD8 167 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 CASTOR1Q8WTX7 329 aa17.47■□□□□ 0.39
ECHDC1-203ENST00000368291 NOTCH1P46531 2555 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 GPR31O00270 319 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 PF4P02776 101 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 RLN1P04808 185 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 TBPP20226 339 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 UCP3P55916 312 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 SSBP1Q04837 148 aaKnown RBP17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 RNASE10Q5GAN6 216 aaKnown RBP17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 LHFPL1Q86WI0 220 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 RHOVQ96L33 236 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 DUX3Q96PT4 197 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 P2RX4Q99571 388 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 RSRP1Q9BUV0 290 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 RABL2AQ9UBK7 228 aaPredicted RBP17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 RABL2BQ9UNT1 228 aa17.46■□□□□ 0.39
ECHDC1-203ENST00000368291 TNXAQ16473 311 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 TMEM65Q6PI78 240 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 LINC00482Q8N8I6 264 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 OR5M8Q8NGP6 311 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 RAX2Q96IS3 184 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 UBE2E2Q96LR5 201 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 GNB4Q9HAV0 340 aa17.45■□□□□ 0.38
ECHDC1-203ENST00000368291 G3V4G9 280 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 KBTBD11O94819 623 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 OR2A4O95047 310 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 TAS2R19P59542 299 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 DEFB136Q30KP8 78 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 SAMD5Q5TGI4 173 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 SSX9Q7RTT3 188 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 C1QL4Q86Z23 238 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 MRPL41Q8IXM3 137 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 MMD2Q8IY49 270 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 ARRDC1Q8N5I2 433 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 TMEM167AQ8TBQ9 72 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 C4orf3Q8WVX3 66 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 SRSF12Q8WXF0 261 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 OR2A7Q96R45 310 aa17.44■□□□□ 0.38
ECHDC1-203ENST00000368291 GSTZ1O43708 216 aaPredicted RBP17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 HPRT1P00492 218 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 HRASP01112 189 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 ZNF735P0CB33 412 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 MYCNOSP40205 109 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 POU2AF1Q16633 256 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 PHLDA2Q53GA4 152 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 STEAP1BQ6NZ63 245 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 LPCAT3Q6P1A2 487 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 CMTM1Q8IZ96 169 aa17.43■□□□□ 0.38
ECHDC1-203ENST00000368291 FABP12A6NFH5 140 aa17.42■□□□□ 0.38
ECHDC1-203ENST00000368291 MSGN1A6NI15 193 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms