RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MAP3K7CLP57077 242 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 TPM4P67936 248 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 BTN3A2P78410 334 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 N4BP2L1Q5TBK1 243 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 Q6ZTI0 123 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 LRRC28Q86X40 367 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 UMODL1-AS1Q8N2C9 162 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 Q8N402 240 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 OR13C8Q8NGS7 320 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 GNPNAT1Q96EK6 184 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 MRPS24Q96EL2 167 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 CCL13Q99616 98 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 HDHD2Q9H0R4 259 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 CXorf21Q9HAI6 301 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 HES4Q9HCC6 221 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 TAAR3PQ9P1P4 343 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 ANAPC10Q9UM13 185 aa1.16□□□□□ -2.22
ECHDC1-201ENST00000368287 TRAV41A0A0B4J266 112 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 A8MUN3 132 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 H0Y980 276 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 M0QZ92 97 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 CXCR6O00574 342 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 TXNDC9O14530 226 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 APOMO95445 188 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 IL3P08700 152 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 CD24P25063 80 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 RPS12P25398 132 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 CDC34P49427 236 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 RAP1GDS1P52306 607 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 HOXC5Q00444 222 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 GNA12Q03113 381 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 SLC38A11Q08AI6 406 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 MED21Q13503 144 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 COTL1Q14019 142 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 RSU1Q15404 277 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 UAP1Q16222 522 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 PLPPR5Q32ZL2 321 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 SLC36A2Q495M3 483 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 CDKL4Q5MAI5 379 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 TNFAIP8L2Q6P589 184 aaPredicted RBP1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 SLC35E3Q7Z769 313 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 SGMS2Q8NHU3 365 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 ZNF675Q8TD23 568 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 DRC3Q9H069 523 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 ZNHIT6Q9NWK9 470 aaKnown RBP1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 HHLA3Q9XRX5 114 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 POLR1DQ9Y2S0 133 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 MED13Q9UHV7 2174 aa1.15□□□□□ -2.23
ECHDC1-201ENST00000368287 COL4A1P02462 1669 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 A0A0A6YYH2 397 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 TMEM269A0A1B0GVZ9 245 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 A6NJ64 397 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 SIGLEC16A6NMB1 481 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 C21orf140B9A014 251 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 SSNA1O43805 119 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 PGLYRP1O75594 196 aaPredicted RBP1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 NPYP01303 97 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 TFPTP0C1Z6 253 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 C8orf88P0DMB2 117 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 MAP2K4P45985 399 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 ERHP84090 104 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 HSP90B2PQ58FF3 399 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 C1orf195Q5TG92 126 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 OR10K2Q6IF99 312 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 OTUD6BQ8N6M0 293 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 OR5J2Q8NH18 312 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 TMEM222Q9H0R3 208 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 VCX3BQ9H321 246 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 FREM1Q5H8C1 2179 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 PCDH15Q96QU1 1955 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 CCDC88AQ3V6T2 1871 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 ZNF532Q9HCE3 1301 aa1.14□□□□□ -2.23
ECHDC1-201ENST00000368287 GRIN2BQ13224 1484 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 H3BT86 120 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 LST1O00453 97 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 PLA2G10O15496 165 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 DEXIO95424 95 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 NSA2O95478 260 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 ARL14EPLP0DKL9 152 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 CCL5P13501 91 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 FKBP1AP62942 108 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 TNFAIP6P98066 277 aaPredicted RBP1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 LRRC75BQ2VPJ9 315 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 TNFAIP8L3Q5GJ75 292 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 PABPC1L2AQ5JQF8 200 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 OR1L8Q8NGR8 309 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 IMMP2LQ96T52 175 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 PXMP4Q9Y6I8 212 aa1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 BAZ2BQ9UIF8 2168 aaKnown RBP1.13□□□□□ -2.23
ECHDC1-201ENST00000368287 RTTNQ86VV8 2226 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 RALGAPA2Q2PPJ7 1873 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 ABCC11Q96J66 1382 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 MAST2Q6P0Q8 1798 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 IGKV2-29A2NJV5 120 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 DDTP30046 118 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 CA5AP35218 305 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 SLCO1A2P46721 670 aa1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 RPL28P46779 137 aaKnown RBP1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 IDH3GP51553 393 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-201ENST00000368287 RPL30P62888 115 aaKnown RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms