RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 IGLV3-21P80748 117 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 ASCL4Q6XD76 172 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 C1orf210Q8IVY1 113 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF664Q8N3J9 261 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF441Q8N8Z8 693 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 OR10AC1Q8NH08 325 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 RARRES2Q99969 163 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 FNDC4Q9H6D8 234 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM106BQ9NUM4 274 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 IDI2-AS1Q9NZ38 188 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 A1L4Q6 167 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 PRR33A8MZF0 331 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 H7C1H1 209 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 KLK10O43240 276 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 MPV17P39210 176 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 RPL31P62899 125 aaKnown RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 OR52E5Q8NH55 327 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 SP7Q8TDD2 431 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 GUCD1Q96NT3 240 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 FOXD3Q9UJU5 478 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 MRPS18BQ9Y676 258 aaKnown RBP7.68□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM56-RWDD3S4R434 201 aa7.68□□□□□ -1.18
SYNE1-209ENST00000367257 CKS2P33552 79 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 TRIP6Q15654 476 aaKnown RBP7.67□□□□□ -1.18
SYNE1-209ENST00000367257 OTPQ5XKR4 325 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 PNKDQ8N490 385 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 OR2K2Q8NGT1 345 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 DYNLRB2Q8TF09 96 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 SNHG12Q9BXW3 62 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 FAM60AQ9NP50 221 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 PLSCR2Q9NRY7 297 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 GRIFINA4D1Z8 144 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 PGLYRP1O75594 196 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-209ENST00000367257 EML2O95834 649 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 MGPP08493 103 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 TSPO2Q5TGU0 170 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 FAM53AQ6NSI3 398 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-209ENST00000367257 POC1AQ8NBT0 407 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 Q96M66 194 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 WNT10AQ9GZT5 417 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 PILRAQ9UKJ1 303 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 ZNF257Q9Y2Q1 563 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 OR4C46A6NHA9 309 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 C3orf80F5H4A9 247 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 ATP5LO75964 103 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 AMBPP02760 352 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 LINC00869P0C866 280 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 LGALS3P17931 250 aaKnown RBP7.67□□□□□ -1.18
SYNE1-209ENST00000367257 ALKBH6Q3KRA9 238 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 PIGYQ3MUY2 71 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 APCDD1LQ8NCL9 501 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 FAM222BQ8WU58 562 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 BPTFQ12830 3046 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM14DPA8MWL7 114 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 UPK3AO75631 287 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 SOX8P57073 446 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 COL9A2Q14055 689 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-209ENST00000367257 FAM71F2Q6NXP2 309 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 PCSK4Q6UW60 755 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 UNQ5815/PRO19632Q6UWF5 114 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 OR51G1Q8NGK1 321 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 CRISPLD2Q9H0B8 497 aa7.67□□□□□ -1.18
SYNE1-209ENST00000367257 FOXS1O43638 330 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 COL9A1P20849 921 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 NANOS3P60323 173 aaKnown RBP7.66□□□□□ -1.18
SYNE1-209ENST00000367257 MEF2CQ06413 473 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-209ENST00000367257 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM170AQ8WVE7 144 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 IGHV3-64DA0A0J9YX35 117 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 PSG1P11464 419 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 UCP2P55851 309 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 PDCD1Q15116 288 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 MDP1Q86V88 176 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TMUB1Q9BVT8 246 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TM2D1Q9BX74 207 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 R3HDMLQ9H3Y0 253 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 PRDM13Q9H4Q3 707 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 ZNFX1Q9P2E3 1918 aaKnown RBP7.66□□□□□ -1.18
SYNE1-209ENST00000367257 NINQ8N4C6 2090 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 GAGE12BA1L429 117 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TM4SF5O14894 197 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM92Q6UXU6 159 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 RTN4RL2Q86UN3 420 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 MAFAQ8NHW3 353 aaPredicted RBP7.66□□□□□ -1.18
SYNE1-209ENST00000367257 RABAC1Q9UI14 185 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 MOB4Q9Y3A3 225 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 C1QL1O75973 258 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 NDUFB4O95168 129 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 CD40P25942 277 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 EFNB2P52799 333 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TMEM187Q14656 261 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 Q6ZS52 159 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 PRNTQ86SH4 94 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 SLC25A38Q96DW6 304 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 FBLN5Q9UBX5 448 aa7.66□□□□□ -1.18
SYNE1-209ENST00000367257 TBL2Q9Y4P3 447 aaKnown RBP7.66□□□□□ -1.18
SYNE1-209ENST00000367257 NUMA1Q14980 2115 aa7.65□□□□□ -1.18
SYNE1-209ENST00000367257 IGHV5-10-1A0A0J9YXX1 117 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms