RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 OR10J6PQ8NGY7 276 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 ALG14Q96F25 216 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 OR5AC2Q9NZP5 309 aa7.48□□□□□ -1.21
SYNE1-206ENST00000367253 FGF9P31371 208 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-206ENST00000367253 SEC61GP60059 68 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TIMM23BQ5SRD1 257 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 ZNF774Q6NX45 483 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 ORAOV1Q8WV07 137 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TSPAN32Q96QS1 320 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 SIGLEC11Q96RL6 698 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 RCC2Q9P258 522 aaKnown RBP7.47□□□□□ -1.21
SYNE1-206ENST00000367253 R4GMQ9 66 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 OTOFQ9HC10 1997 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TRAV39A0A0B4J263 110 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 A0A1W2PRX2 142 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 C9orf170A2RU37 121 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 C11orf94C9JXX5 98 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 HOXA5P20719 270 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 EFNA4P52798 201 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 CXorf67Q86X51 503 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-206ENST00000367253 LINC01356Q8N9X3 169 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TLNRD1Q9H1K6 362 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 ST3GAL6Q9Y274 331 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 PLXNA1Q9UIW2 1896 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 KIAA2026Q5HYC2 2103 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 IGKV3-7A0A075B6H7 116 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TRAV9-2A0A087WT02 112 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 MED19A0JLT2 244 aaPredicted RBP7.47□□□□□ -1.21
SYNE1-206ENST00000367253 P01737 135 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 MAS1LP35410 378 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 MMP16P51512 607 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 SP6Q3SY56 376 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 OR1L8Q8NGR8 309 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 MARS2Q96GW9 593 aaKnown RBP7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TMEM204Q9BSN7 226 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 PSG11Q9UQ72 335 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 PLCE1Q9P212 2302 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 LOC101059948A0A1B0GTJ6 334 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 J3KT08 172 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 VENTXO95231 258 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 SELENOPP49908 381 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 TDGF1P3P51864 188 aa7.47□□□□□ -1.21
SYNE1-206ENST00000367253 SCN1AP35498 2009 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 CACNA1CQ13936 2221 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 DOCK9Q9BZ29 2069 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 KCNE1BA0A087WTH5 132 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.21
SYNE1-206ENST00000367253 PLPPR5Q32ZL2 321 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 OSR2Q8N2R0 312 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 OR4D5Q8NGN0 318 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 SSBP3Q9BWW4 388 aaPredicted RBP7.46□□□□□ -1.21
SYNE1-206ENST00000367253 SMDT1Q9H4I9 107 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 A0A0G2JMZ2 1700 aa7.46□□□□□ -1.21
SYNE1-206ENST00000367253 CA11O75493 328 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF735P0CB33 412 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 OR4A5Q8NH83 315 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 SDF2Q99470 211 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 SEMA5BQ9P283 1151 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 PILRAQ9UKJ1 303 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 NPIPB8E9PQR5 432 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 TAPBPO15533 448 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 NPIPB7O75200 414 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 CRPP02741 224 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 DUSP5Q16690 384 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 CACNG8Q8WXS5 425 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 KCNS1Q96KK3 526 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF385AQ96PM9 386 aaKnown RBP7.46□□□□□ -1.22
SYNE1-206ENST00000367253 TRAV5A0A0B4J249 113 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 ODAMA1E959 279 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 IL18BPO95998 194 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 COL8A1P27658 744 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 SSBP2P81877 361 aaPredicted RBP7.46□□□□□ -1.22
SYNE1-206ENST00000367253 CT83Q5H943 113 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 TMEM255AQ5JRV8 349 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 SPSB4Q96A44 273 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 MYEOVQ96EZ4 313 aa7.46□□□□□ -1.22
SYNE1-206ENST00000367253 CEP250Q9BV73 2442 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 HBZP02008 142 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 MEF2CQ06413 473 aaPredicted RBP7.45□□□□□ -1.22
SYNE1-206ENST00000367253 TWIST1Q15672 202 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 LGALSLQ3ZCW2 172 aaPredicted RBP7.45□□□□□ -1.22
SYNE1-206ENST00000367253 OR10S1Q8NGN2 331 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 OR2V2Q96R30 315 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 ABHD14AQ9BUJ0 271 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 ICAM5Q9UMF0 924 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 K7ENP7 123 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 IGLV3-27P01718 113 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 SEMG1P04279 462 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 ZNF32P17041 273 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 FNDC7Q5VTL7 733 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 OR10V1Q8NGI7 309 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 RNASE8Q8TDE3 154 aaKnown RBP7.45□□□□□ -1.22
SYNE1-206ENST00000367253 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 MRPS18BQ9Y676 258 aaKnown RBP7.45□□□□□ -1.22
SYNE1-206ENST00000367253 A0A087WUJ7 227 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 hCG_38984A0A1B0GV85 526 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 MGST3O14880 152 aa7.45□□□□□ -1.22
SYNE1-206ENST00000367253 SYNGR2O43760 224 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms