RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 C8orf46Q8TAG6 207 aa9.11□□□□□ -0.95
CSNK1E-202ENST00000366216 CD300LFQ8TDQ1 290 aa9.11□□□□□ -0.95
CSNK1E-202ENST00000366216 HEXA-AS1Q9H8Q6 139 aa9.11□□□□□ -0.95
CSNK1E-202ENST00000366216 DNAH9Q9NYC9 4486 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 A0A087X0M5 115 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 A0A1B0GU03 582 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 A0A1B0GX30 115 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 A0A1W2PPH5 198 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 C17orf98A8MV24 154 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 F5H0A9 414 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 SLC31A2O15432 143 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 PROP1O75360 226 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 DEDDO75618 318 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 MMP23AO75900 390 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 TSPAN15O95858 294 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 IGKV1-39P01597 117 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 MBPP02686 304 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 RBP4P02753 201 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 IGKV1D-39P04432 117 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 CCL3L1P16619 93 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 NFYBP25208 207 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 DUTP33316 252 aaKnown RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 KIR2DS2P43631 304 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 SMCO1Q147U7 214 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 WDR25Q64LD2 544 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 THOC7Q6I9Y2 204 aaKnown RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 ZNF767PQ75MW2 155 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 FAM219AQ8IW50 185 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 LINC00311Q8N616 119 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 INO80EQ8NBZ0 244 aaPredicted RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 ZNF596Q8TC21 504 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 TCTEX1D2Q8WW35 142 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 DCUN1D4Q92564 292 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 PATZ1Q9HBE1 687 aaKnown RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 PAIP2BQ9ULR5 123 aaKnown RBP9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 POMT1Q9Y6A1 747 aa9.1□□□□□ -0.95
CSNK1E-202ENST00000366216 PPIAL4CA0A0B4J2A2 164 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 LINC00473A8K010 186 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 J3QL48 77 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 K7EPK0 472 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 RBFOX2O43251 390 aaKnown RBP eCLIP9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 PITX3O75364 302 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 NUP62P37198 522 aaPredicted RBP9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 LPAR6P43657 344 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 S100A10P60903 97 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 PRR20EP86478 221 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 PRR20CP86479 221 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 PRR20DP86480 221 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 PRR20BP86481 221 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 PRR20AP86496 221 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 BEAN1Q3B7T3 259 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 ODF3L1Q8IXM7 274 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 SPAG16Q8N0X2 631 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 FAM71E2Q8N5Q1 922 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 LY6G5BQ8NDX9 201 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 OR1S1Q8NH92 325 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 RRNAD1Q96FB5 475 aaKnown RBP9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 ADTRPQ96IZ2 230 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 ZNF251Q9BRH9 671 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 ARL6Q9H0F7 186 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 MMP26Q9NRE1 261 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 OR5AC2Q9NZP5 309 aa9.09□□□□□ -0.95
CSNK1E-202ENST00000366216 E5RGE8 158 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 M0R1X1 148 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 TSC22D2O75157 780 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 IGKV1-5P01602 117 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 PRB2P02812 416 aaPredicted RBP9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 MMP9P14780 707 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 NKX2-1P43699 371 aaPredicted RBP9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 THBS3P49746 956 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 BRWD1-AS2P59051 145 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 ID3Q02535 119 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 UTF1Q5T230 341 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 KPRPQ5T749 579 aaPredicted RBP9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 NCR3LG1Q68D85 454 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 FAM71F2Q6NXP2 309 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 TEX261Q6UWH6 196 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 BTNL3Q6UXE8 466 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 REC114Q7Z4M0 266 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 SLC51BQ86UW2 128 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 C11orf42Q8N5U0 333 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 FAM110DQ8TAY7 271 aaPredicted RBP9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 DDB2Q92466 427 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 LEAP2Q969E1 77 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 MS4A7Q9GZW8 240 aaPredicted RBP9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 PLEKHA2Q9HB19 425 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 COA4Q9NYJ1 87 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 NSG2Q9Y328 171 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 PRELID3BQ9Y3B1 194 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 LSM5Q9Y4Y9 91 aaKnown RBP9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 AUP1Q9Y679 476 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 SESN1Q9Y6P5 492 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 U3KQ87 197 aa9.08□□□□□ -0.96
CSNK1E-202ENST00000366216 SAA2-SAA4A0A096LPE2 208 aa9.07□□□□□ -0.96
CSNK1E-202ENST00000366216 A0A0G2JRQ6 117 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms