RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SPACA1Q9HBV2 294 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 RANGRFQ9HD47 186 aaPredicted RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 RAB9BQ9NP90 201 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 FGF20Q9NP95 211 aaPredicted RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 KCNIP1Q9NZI2 227 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 RCC2Q9P258 522 aaKnown RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 CKLFQ9UBR5 152 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 CLEC2DQ9UHP7 191 aa3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 RPL36Q9Y3U8 105 aaKnown RBP3.95□□□□□ -1.78
RNU4-4P-201ENST00000364588 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 TRBV5-5A0A0J9YX44 114 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 FCN1O00602 326 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 OGG1O15527 345 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 WBP4O75554 376 aaKnown RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 CRTAPO75718 401 aaPredicted RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 ATP5HO75947 161 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 NDUFA3O95167 84 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 LGALS1P09382 135 aaKnown RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 SAA2P0DJI9 122 aaPredicted RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 MGMTP16455 207 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 FUT3P21217 361 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 RPS11P62280 158 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 CX3CL1P78423 397 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 RPL24P83731 157 aaKnown RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 PITPNAQ00169 270 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 Q499Y3 187 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 DMKNQ6E0U4 476 aaPredicted RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 TRAT1Q6PIZ9 186 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 FAM131AQ6UXB0 335 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 GLDNQ6ZMI3 551 aaPredicted RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF833PQ6ZTB9 187 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 GAPTQ8N292 157 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 MINDY2Q8NBR6 621 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 NPBQ8NG41 125 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 MRPL30Q8TCC3 161 aaKnown RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 IL1F10Q8WWZ1 152 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 C17orf77Q96MU5 243 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR4C12Q96R67 309 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 CLCC1Q96S66 551 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 FAM103A1Q9BTL3 118 aaKnown RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 C9orf16Q9BUW7 83 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 GHITMQ9H3K2 345 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 BABAM2Q9NXR7 383 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 JPT1Q9UK76 154 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 FOXA2Q9Y261 457 aaPredicted RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 ERGIC3Q9Y282 383 aa3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 DYNC2H1Q8NCM8 4307 aaKnown RBP3.94□□□□□ -1.78
RNU4-4P-201ENST00000364588 STAB2Q8WWQ8 2551 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 H7C2Y5 167 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 YPEL1O60688 119 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 PDCD6O75340 191 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CA11O75493 328 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 GPX5O75715 221 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 SC5DO75845 299 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 HSPB1P04792 205 aaKnown RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR8U9P0C7N5 309 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CT45A6P0DMU7 189 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CT45A5P0DMU8 189 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CT45A7P0DMV0 189 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 MYL12AP19105 171 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 DCKP27707 260 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CAPGP40121 348 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 LINC01547P58512 204 aaPredicted RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 TPPP2P59282 170 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 HTD2P86397 168 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 DEFA5Q01523 94 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 HMGN3Q15651 99 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF876PQ49A33 203 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 ACTBL2Q562R1 376 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 RPL39P5Q59GN2 51 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 YIF1BQ5BJH7 314 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZNF660Q6AZW8 331 aaPredicted RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 OR10K2Q6IF99 312 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 ZFP1Q6P2D0 407 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 UNQ5815/PRO19632Q6UWF5 114 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 PPP1R27Q86WC6 154 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 LFNGQ8NES3 379 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 SETD6Q8TBK2 473 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 GALMQ96C23 342 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 ISOC1Q96CN7 298 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 FLYWCH2Q96CP2 140 aaKnown RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 ABHD14BQ96IU4 210 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 PGLYRP3Q96LB9 341 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 RDH12Q96NR8 316 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 YPEL2Q96QA6 119 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 SULT4A1Q9BR01 284 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 TM2D3Q9BRN9 247 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 FAAP24Q9BTP7 215 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 PARP12Q9H0J9 701 aaKnown RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CST11Q9H112 138 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 IFI27L2Q9H2X8 130 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 KCNK15Q9H427 330 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 EDA2RQ9HAV5 297 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 SCRT2Q9NQ03 307 aa3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 CHCHD3Q9NX63 227 aaKnown RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 DIMT1Q9UNQ2 313 aaKnown RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 EXOSC1Q9Y3B2 195 aaKnown RBP3.93□□□□□ -1.78
RNU4-4P-201ENST00000364588 NUBP2Q9Y5Y2 271 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms