RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 WASHC3Q9Y3C0 194 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 C2CD3Q4AC94 2353 aa8.6□□□□□ -1.03
SNX6-201ENST00000362031 TRAV3A0A0B4J244 114 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 MPTX1A8MV57 137 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 SHOXO15266 292 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 TXNL1O43396 289 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 ADAP1O75689 374 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 IL5P05113 134 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 SRD5A1P18405 259 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 G6PCP35575 357 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 RAG2P55895 527 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 TAS2R31P59538 309 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 CATR1Q13166 79 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 EBI3Q14213 229 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 MRGPRG-AS1Q2M3A8 158 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 SSX9Q7RTT3 188 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 ZNF431Q8TF32 576 aaPredicted RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 ADTRPQ96IZ2 230 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 LIN7CQ9NUP9 197 aaKnown RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 PRELID3BQ9Y3B1 194 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 C7orf66A4D0T2 115 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 SH2D7A6NKC9 451 aaPredicted RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 CHST1O43916 411 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 KRASP01116 189 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 PJVKQ0ZLH3 352 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 HES1Q14469 280 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 LRRC75BQ2VPJ9 315 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 TMEM177Q53S58 311 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 TMEM268Q5VZI3 342 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 Q6ZRM9 215 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 PDPNQ86YL7 162 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 FAM219AQ8IW50 185 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 SLC35G3Q8N808 338 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 MITD1Q8WV92 249 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 FLYWCH2Q96CP2 140 aaKnown RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 WDR89Q96FK6 387 aaPredicted RBP8.59□□□□□ -1.03
SNX6-201ENST00000362031 SEC22AQ96IW7 307 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 TMEM56Q96MV1 263 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 CDC42EP3Q9UKI2 254 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 TMEM56-RWDD3S4R434 201 aa8.59□□□□□ -1.03
SNX6-201ENST00000362031 DBX1A6NMT0 343 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 RNF212BA8MTL3 300 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 RBFOX2O43251 390 aaKnown RBP eCLIP8.58□□□□□ -1.041e-8■■■■■ 29.5
SNX6-201ENST00000362031 DUS4LO95620 317 aaKnown RBP8.58□□□□□ -1.04
SNX6-201ENST00000362031 MOSP00540 346 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 APOA2P02652 100 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 SERPINE2P07093 398 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 MYOD1P15172 320 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 HNF1AP20823 631 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 MC5RP33032 325 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 DYNLT3P51808 116 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 RPS16P62249 146 aaKnown RBP8.58□□□□□ -1.04
SNX6-201ENST00000362031 UXS1Q8NBZ7 420 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 OR4S2Q8NH73 311 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 HARBI1Q96MB7 349 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 KCNIP3Q9Y2W7 256 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 FBN1P35555 2871 aaKnown RBP8.58□□□□□ -1.04
SNX6-201ENST00000362031 A6NDX4 124 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 TRIM77I1YAP6 450 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 FCN1O00602 326 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 CCSO14618 274 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 CRLF1O75462 422 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 DHFRP00374 187 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 HPRT1P00492 218 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 AMY1AP04745 511 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 P0C879 139 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 S100GP29377 79 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 AP2S1P53680 142 aaPredicted RBP8.58□□□□□ -1.04
SNX6-201ENST00000362031 PSG5Q15238 335 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 RTL8BQ17RB0 113 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 OR4C13Q8NGP0 309 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 GRPEL2Q8TAA5 225 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 RHOVQ96L33 236 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 OR51J1Q9H342 316 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 PLEKHA2Q9HB19 425 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 TCF19Q9Y242 345 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 NSG2Q9Y328 171 aa8.58□□□□□ -1.04
SNX6-201ENST00000362031 TET2Q6N021 2002 aaPredicted RBP8.57□□□□□ -1.04
SNX6-201ENST00000362031 MARCH11A6NNE9 402 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 SLC25A17O43808 307 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 SIX6O95475 246 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 CRYGBP07316 175 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 HOXB5P09067 269 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 OR9G9P0C7N8 305 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 FAM106CPP0CH98 169 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 SAA1P0DJI8 122 aaPredicted RBP8.57□□□□□ -1.04
SNX6-201ENST00000362031 TMEM11P17152 192 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 BRS3P32247 399 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 POLR2GP62487 172 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNX6-201ENST00000362031 SSBP2P81877 361 aaPredicted RBP8.57□□□□□ -1.04
SNX6-201ENST00000362031 Q6ZS46 218 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 C12orf45Q8N5I9 185 aaPredicted RBP8.57□□□□□ -1.04
SNX6-201ENST00000362031 LRTM2Q8N967 370 aa8.57□□□□□ -1.04
SNX6-201ENST00000362031 OR2T10Q8NGZ9 312 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms