RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 FAM216AQ8WUB2 273 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 ACAA1P09110 424 aaPredicted RBP11.42□□□□□ -0.58
LDB3-202ENST00000361373 IGFBP3P17936 291 aaPredicted RBP11.42□□□□□ -0.58
LDB3-202ENST00000361373 TCL1AP56279 114 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 MEF2BQ02080 365 aaPredicted RBP11.42□□□□□ -0.58
LDB3-202ENST00000361373 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
LDB3-202ENST00000361373 PHOX2AO14813 284 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 TMEM191AQ9H0A3 160 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 ZNF318Q5VUA4 2279 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 ZNF837Q96EG3 531 aaPredicted RBP11.41□□□□□ -0.58
LDB3-202ENST00000361373 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 J3QR89 54 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 CD300CQ08708 224 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 C1QL2Q7Z5L3 287 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 RTTNQ86VV8 2226 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 A0A0G2JLM5 398 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 MT-ND6P03923 174 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 PRSS1P07477 247 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 CXCL2P19875 107 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 RPS20P60866 119 aaKnown RBP11.41□□□□□ -0.58
LDB3-202ENST00000361373 HERVK_113P61574 105 aa11.41□□□□□ -0.58
LDB3-202ENST00000361373 CHD5Q8TDI0 1954 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 ZG16O60844 167 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 RHBDL1O75783 438 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 NPPCP23582 126 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 TBR1Q16650 682 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 TMEM183BQ1AE95 376 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 OR52M1Q8NGK5 317 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 LEAP2Q969E1 77 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 ELOVL1Q9BW60 279 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 UCP1P25874 307 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 TSPOP30536 169 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 CENPVQ7Z7K6 275 aaPredicted RBP11.4□□□□□ -0.58
LDB3-202ENST00000361373 PRNTQ86SH4 94 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 GUCA2BQ16661 112 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 HIST3H3Q16695 136 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 SYT8Q8NBV8 401 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 ZNF738Q8NE65 137 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 PSMG3Q9BT73 122 aaPredicted RBP11.4□□□□□ -0.58
LDB3-202ENST00000361373 PLSCR4Q9NRQ2 329 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 INTS1Q8N201 2190 aaKnown RBP11.4□□□□□ -0.58
LDB3-202ENST00000361373 RLFQ13129 1914 aa11.4□□□□□ -0.58
LDB3-202ENST00000361373 FAM216BQ8N7L0 139 aa11.4□□□□□ -0.59
LDB3-202ENST00000361373 SPRR3Q9UBC9 169 aa11.4□□□□□ -0.59
LDB3-202ENST00000361373 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.39□□□□□ -0.59
LDB3-202ENST00000361373 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 AP4M1O00189 453 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 HTN1P15515 57 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 HNRNPA3P51991 378 aaKnown RBP11.39□□□□□ -0.59
LDB3-202ENST00000361373 ZNF362Q5T0B9 420 aaPredicted RBP11.39□□□□□ -0.59
LDB3-202ENST00000361373 MIC13Q5XKP0 118 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 OR10D4PQ8NGN7 298 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 A0A0G2JK05 382 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 TCAPO15273 167 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 FCGR2BP31994 310 aaPredicted RBP11.39□□□□□ -0.59
LDB3-202ENST00000361373 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
LDB3-202ENST00000361373 ELOBQ15370 118 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 DDB2Q92466 427 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 SOSTQ9BQB4 213 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 DCTN5Q9BTE1 182 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 PARD6AQ9NPB6 346 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 PGPA6NDG6 321 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 LY6EQ16553 131 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 WDFY1Q8IWB7 410 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 IL36RNQ9UBH0 155 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 BMPERQ8N8U9 685 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 ZIC4Q8N9L1 334 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 RAX2Q96IS3 184 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 C12orf57Q99622 126 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 SCN2AQ99250 2005 aa11.39□□□□□ -0.59
LDB3-202ENST00000361373 M0R2Z0 102 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 PMS2P11Q13670 270 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 Q1RN00 199 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 MRPL54Q6P161 138 aaKnown RBP11.38□□□□□ -0.59
LDB3-202ENST00000361373 LRP11Q86VZ4 500 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 J3KRW8 73 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 FOSL1P15407 271 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 DHRS11Q6UWP2 260 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 CDC42EP3Q9UKI2 254 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 Q6ZN92 141 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 OR13A1Q8NGR1 328 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 ARHGEF17Q96PE2 2063 aaPredicted RBP11.38□□□□□ -0.59
LDB3-202ENST00000361373 CD8AP01732 235 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
LDB3-202ENST00000361373 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 RTN4RQ9BZR6 473 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 OR51M1Q9H341 326 aa11.38□□□□□ -0.59
LDB3-202ENST00000361373 ZNF646O15015 1829 aaPredicted RBP11.38□□□□□ -0.59
LDB3-202ENST00000361373 PINLYPA6NC86 204 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 APCSP02743 223 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 FAM3BP58499 235 aaPredicted RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 DSCR9P59020 149 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 ZNF660Q6AZW8 331 aaPredicted RBP11.37□□□□□ -0.59
LDB3-202ENST00000361373 HSPB7Q9UBY9 170 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 SNURFLB1AK76 121 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 M0QZK8 103 aa11.37□□□□□ -0.59
LDB3-202ENST00000361373 CSN3P07498 182 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms