RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ZNF134P52741 427 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 NCR3LG1Q68D85 454 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 DEFB108BQ8NET1 73 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 YPEL2Q96QA6 119 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 MIOXQ9UGB7 285 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 MAP1LC3B2A6NCE7 125 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 IFITM10A6NMD0 228 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 F2RL2O00254 374 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 YIF1AO95070 293 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 MAP1LC3BQ9GZQ8 125 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.71■□□□□ 0.59
LDB1-201ENST00000361198 CALYQ9NYX4 217 aa18.71■□□□□ 0.59
LDB1-201ENST00000361198 FAM87AP0C7U9 286 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 TNFSF4P23510 183 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 DUTP33316 252 aaKnown RBP18.7■□□□□ 0.58
LDB1-201ENST00000361198 BSPH1Q075Z2 132 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 UTF1Q5T230 341 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 STUMQ69YW2 141 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 RPP25LQ8N5L8 163 aaKnown RBP18.7■□□□□ 0.58
LDB1-201ENST00000361198 DCAF16Q9NXF7 216 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 OR6C3Q9NZP0 311 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 RAI1Q7Z5J4 1906 aaPredicted RBP18.7■□□□□ 0.58
LDB1-201ENST00000361198 CLDN34H7C241 214 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 CYB5BO43169 146 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BKO60814 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BJP06899 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 CGB3P0DN86 165 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 CGB7P0DN87 165 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BOP23527 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BBP33778 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BDP58876 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BCP62807 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST2H2BEQ16778 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BHQ93079 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 SDSLQ96GA7 329 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BNQ99877 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 HIST1H2BMQ99879 126 aa18.7■□□□□ 0.58
LDB1-201ENST00000361198 UBE2L5PA0A1B0GUS4 154 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 IFNA1P01562 189 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 NDUFA6P56556 154 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 ATP6V1FQ16864 119 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 C17orf58Q2M2W7 97 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 H2BFWTQ7Z2G1 175 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 TANC2Q9HCD6 1990 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 MARCH11A6NNE9 402 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 RAB29O14966 203 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 IGKV1D-33P01593 117 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 IGKV1-33P01594 117 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 CCL8P80075 99 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 ADIPOQQ15848 244 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 Q8TCH9 128 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 GGACTQ9BVM4 153 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 LAMP3Q9UQV4 416 aa18.69■□□□□ 0.58
LDB1-201ENST00000361198 HCFC1P51610 2035 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 OR4A8P0C604 315 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 RPL39P5Q59GN2 51 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 WDR25Q64LD2 544 aaPredicted RBP18.68■□□□□ 0.58
LDB1-201ENST00000361198 OR8G2PQ6IF36 304 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 ZCCHC24Q8N2G6 241 aaKnown RBP18.68■□□□□ 0.58
LDB1-201ENST00000361198 GAFA1Q96PS6 74 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 CLN8Q9UBY8 286 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 PKDREJQ9NTG1 2253 aa18.68■□□□□ 0.58
LDB1-201ENST00000361198 PMS2P5A8MQ11 134 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 CEBPZOSA8MTT3 80 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 IGHV2-70P01814 119 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 TRGC2P03986 189 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 ELLP55199 621 aaPredicted RBP18.67■□□□□ 0.58
LDB1-201ENST00000361198 LEAP2Q969E1 77 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 FAM210BQ96KR6 192 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 CCL13Q99616 98 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 IFI27L2Q9H2X8 130 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 SLC39A9Q9NUM3 307 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 KALRNO60229 2985 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 SLC31A2O15432 143 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 TGOLN2O43493 480 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 FCGR3BO75015 233 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 GYPAP02724 150 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 C1orf87Q8N0U7 546 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 LHX4Q969G2 390 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 ZDHHC16Q969W1 377 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 CTDSP1Q9GZU7 261 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 NCOR1P1Q9H4R4 102 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 POLEQ07864 2286 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 IGF2RP11717 2491 aa18.67■□□□□ 0.58
LDB1-201ENST00000361198 TRBV24-1A0A075B6N3 115 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 M0R1X1 148 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 ZG16O60844 167 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 FAM216BQ8N7L0 139 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 TMEM147Q9BVK8 224 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 FAM234AQ9H0X4 552 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 MSRB2Q9Y3D2 182 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 SPTA1P02549 2419 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 RBMXL2O75526 392 aaKnown RBP18.66■□□□□ 0.58
LDB1-201ENST00000361198 CD81P60033 236 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 R3HDM4Q96D70 268 aa18.66■□□□□ 0.58
LDB1-201ENST00000361198 GAR1Q9NY12 217 aaKnown RBP18.66■□□□□ 0.58
LDB1-201ENST00000361198 SEC14L6B5MCN3 397 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 CD55P08174 381 aa18.65■□□□□ 0.58
LDB1-201ENST00000361198 ACSM6Q6P461 480 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms