RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ZNF714Q96N38 554 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 REG4Q9BYZ8 158 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 JPT1Q9UK76 154 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 CXorf65A6NEN9 183 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 TMEM105Q8N8V8 129 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 LILRB1Q8NHL6 650 aaPredicted RBP13.84□□□□□ -0.19
SCAF1-201ENST00000360565 ZNF785A8K8V0 405 aa13.83□□□□□ -0.19
SCAF1-201ENST00000360565 SRP19P09132 144 aaKnown RBP13.83□□□□□ -0.19
SCAF1-201ENST00000360565 G0S2P27469 103 aa13.83□□□□□ -0.19
SCAF1-201ENST00000360565 CEACAM3P40198 252 aa13.83□□□□□ -0.19
SCAF1-201ENST00000360565 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 USF1P22415 310 aaPredicted RBP13.83□□□□□ -0.2
SCAF1-201ENST00000360565 HNRNPA3P51991 378 aaKnown RBP13.83□□□□□ -0.2
SCAF1-201ENST00000360565 ACP7Q6ZNF0 438 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 AMMECR1Q9Y4X0 333 aaPredicted RBP13.83□□□□□ -0.2
SCAF1-201ENST00000360565 IGHV1-2P23083 117 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 TMEM183BQ1AE95 376 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 SSX7Q7RTT5 188 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 RAB1BQ9H0U4 201 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 LRRK1Q38SD2 2015 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 SLC31A2O15432 143 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 RPL39P5Q59GN2 51 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 GLRX5Q86SX6 157 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 OR13A1Q8NGR1 328 aa13.83□□□□□ -0.2
SCAF1-201ENST00000360565 FA2HQ7L5A8 372 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 WDYHV1Q96HA8 205 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 CYTL1Q9NRR1 136 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 TRAV24A0A0B4J272 114 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 PLAUP00749 431 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 FAM201AQ5SY85 155 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 QTRT1Q9BXR0 403 aaKnown RBP13.82□□□□□ -0.2
SCAF1-201ENST00000360565 ASCL3Q9NQ33 180 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 TRGC1P0CF51 173 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 HTR1DP28221 377 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 ZNF581Q9P0T4 197 aa13.82□□□□□ -0.2
SCAF1-201ENST00000360565 KBTBD11O94819 623 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 LINC00869P0C866 280 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 ARL14EPLP0DKL9 152 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 RPL8P62917 257 aaKnown RBP13.81□□□□□ -0.2
SCAF1-201ENST00000360565 THYN1Q9P016 225 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 CEACAM18A8MTB9 384 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 ID3Q02535 119 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 LRRC75BQ2VPJ9 315 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 OR5AU1Q8NGC0 362 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 TXNDC17Q9BRA2 123 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 CSN3P07498 182 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 OR4A8P0C604 315 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 COX19Q49B96 90 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 KRTCAP3Q53RY4 240 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 ZNF385CQ66K41 422 aaPredicted RBP13.81□□□□□ -0.2
SCAF1-201ENST00000360565 HCP5Q6MZN7 132 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 C5orf24Q7Z6I8 188 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 CDX1P47902 265 aaPredicted RBP13.81□□□□□ -0.2
SCAF1-201ENST00000360565 MMDQ15546 238 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 FAM117AQ9C073 453 aa13.81□□□□□ -0.2
SCAF1-201ENST00000360565 IFNL4K9M1U5 179 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 GNG7O60262 68 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 COL8A1P27658 744 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 HIST3H3Q16695 136 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 ASCL5Q7RTU5 278 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 PERPQ96FX8 193 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 PAXXQ9BUH6 204 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 TMEM250H0YL14 139 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 MFAP2P55001 183 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 OR8B3Q8NGG8 313 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 OR8B2Q96RD0 313 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 RASL11BQ9BPW5 248 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 IDI2-AS1Q9NZ38 188 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 AGAP20933 346 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 OTX1P32242 354 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-201ENST00000360565 ZNF525Q8N782 197 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 MEGF10Q96KG7 1140 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 NOTCH3Q9UM47 2321 aa13.8□□□□□ -0.2
SCAF1-201ENST00000360565 GLRXP35754 106 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 RPL27AP46776 148 aaKnown RBP13.79□□□□□ -0.2
SCAF1-201ENST00000360565 PQLC2Q6ZP29 291 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 LRTM2Q8N967 370 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 STXBP6Q8NFX7 210 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 USF3Q68DE3 2245 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 E9PLN8 166 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 P01737 135 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 CCL20P78556 96 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 LRP11Q86VZ4 500 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 OR2D3Q8NGH3 330 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 PRSS3P2Q8NHM4 247 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 IGKV3D-15A0A087WSY6 115 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 SLC25A17O43808 307 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 IGHV3-48P01763 117 aa13.79□□□□□ -0.2
SCAF1-201ENST00000360565 METTL1Q9UBP6 276 aaKnown RBP13.79□□□□□ -0.2
SCAF1-201ENST00000360565 TFF1P04155 84 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 PKIAP61925 76 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 Q0VFX4 171 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 SRP14P37108 136 aaKnown RBP13.78□□□□□ -0.2
SCAF1-201ENST00000360565 C9orf106Q8NAJ2 232 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 NPCDR1Q9BY65 106 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 PAM16Q9Y3D7 125 aa13.78□□□□□ -0.2
SCAF1-201ENST00000360565 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.78□□□□□ -0.28e-7■■■□□ 16.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms