RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SFRP2Q96HF1 295 aa15.71■□□□□ 0.11
SHANK1-202ENST00000359082 LINC01560Q8TB33 94 aa15.71■□□□□ 0.1
SHANK1-202ENST00000359082 LINC00470Q9BZP3 86 aa15.71■□□□□ 0.1
SHANK1-202ENST00000359082 COLQQ9Y215 455 aaPredicted RBP15.71■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A10PA6NDY2 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A18PA6NE21 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A16PA6NEW6 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A20PA6NIJ5 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A8PA6NJQ4 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A7PA6NKC0 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A22PA8MWA6 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A12PA8MX19 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A5PA8MXJ8 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A23PA8MXZ1 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A15PP0C7V4 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A13PP0C7W8 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A14PP0C7W9 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A24PP0C7X0 464 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 RND3P61587 244 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 TEX29Q8N6K0 151 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 HLA-DRB1P01911 266 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 TRGC1P0CF51 173 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 FGF5P12034 268 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 ACSF3Q4G176 576 aaPredicted RBP15.7■□□□□ 0.1
SHANK1-202ENST00000359082 C5orf66Q9H5L9 145 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 KIAA0100Q14667 2235 aaKnown RBP15.7■□□□□ 0.1
SHANK1-202ENST00000359082 SLC25A45Q8N413 288 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 CTSBP07858 339 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 SCN3AQ9NY46 2000 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 IL4P05112 153 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 ZNF506Q5JVG8 444 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 LINC00469Q8N7U9 141 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 OR9G1Q8NH87 305 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 KIR2DL4Q99706 377 aa15.7■□□□□ 0.1
SHANK1-202ENST00000359082 ZNF638Q14966 1978 aaKnown RBP15.69■□□□□ 0.1
SHANK1-202ENST00000359082 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
SHANK1-202ENST00000359082 LOC101059948A0A1B0GTJ6 334 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 LNP1A1A4G5 178 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 ZNF146Q15072 292 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 TCF24Q7RTU0 167 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 IGHV3-49A0A0A0MS15 119 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 FCARP24071 287 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 CACNG7P62955 275 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 RPL39P5Q59GN2 51 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 NPIPB3Q92617 1050 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 TXNDC17Q9BRA2 123 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 ZNFX1Q9P2E3 1918 aaKnown RBP15.69■□□□□ 0.1
SHANK1-202ENST00000359082 NABP2Q9BQ15 211 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 SLC25A38Q96DW6 304 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 G6PC2Q9NQR9 355 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 TNFSF10P50591 281 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 LINC00518Q8N0U6 118 aa15.69■□□□□ 0.1
SHANK1-202ENST00000359082 PRR19A6NJB7 356 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 ERVH48-1M5A8F1 160 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 CRYBA2P53672 197 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 TMEM187Q14656 261 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 TMEM186Q96B77 213 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 TRBV5-7A0A0A0MS05 114 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 LIPFP07098 398 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 PCP4P48539 62 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 LCN2P80188 198 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 TMEM101Q96IK0 257 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 TCF19Q9Y242 345 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 COL5A3P25940 1745 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-202ENST00000359082 C4orf51C9J302 202 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 RPS11P62280 158 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHANK1-202ENST00000359082 AQP10Q96PS8 301 aa15.68■□□□□ 0.1
SHANK1-202ENST00000359082 ZNF729A6NN14 1252 aaPredicted RBP15.67■□□□□ 0.1
SHANK1-202ENST00000359082 DMRTA2Q96SC8 542 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 MRPL32Q9BYC8 188 aaKnown RBP15.67■□□□□ 0.1
SHANK1-202ENST00000359082 KCNE5Q9UJ90 142 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 DLEC1Q9Y238 1755 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 FAM90A26D6RGX4 464 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 RRHO14718 337 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 TRGV3P03979 118 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 CD69Q07108 199 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 SAXO1Q8IYX7 474 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 Q96M66 194 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 DNAL4O96015 105 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 RAB9AP51151 201 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 TUBA4BQ9H853 241 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 PILRBQ9UKJ0 227 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 MYO16Q9Y6X6 1858 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 CEACAM4O75871 244 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 RECKO95980 971 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 ZNF418Q8TF45 676 aaPredicted RBP15.67■□□□□ 0.1
SHANK1-202ENST00000359082 TMEM54Q969K7 222 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 TMEM70Q9BUB7 260 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 LDLRAD4O15165 306 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 RSPO4Q2I0M5 234 aaPredicted RBP15.67■□□□□ 0.1
SHANK1-202ENST00000359082 TMEM170BQ5T4T1 132 aa15.67■□□□□ 0.1
SHANK1-202ENST00000359082 ALKBH7Q9BT30 221 aaPredicted RBP15.67■□□□□ 0.1
SHANK1-202ENST00000359082 WISP3O95389 354 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-202ENST00000359082 CENPWQ5EE01 88 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 MARVELD3Q96A59 401 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 C18orf15Q96N68 181 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 CBLN4Q9NTU7 201 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 HS3ST3B1Q9Y662 390 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 QSER1Q2KHR3 1735 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 SMIM13P0DJ93 91 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms