RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PDPNQ86YL7 162 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 ARL6Q9H0F7 186 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 TMEM140Q9NV12 185 aa13.8□□□□□ -0.2
TPM1-205ENST00000357980 IGHV1-3A0A0C4DH29 117 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
TPM1-205ENST00000357980 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 SSSCA1O60232 199 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 HRASP01112 189 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
TPM1-205ENST00000357980 HTR1DP28221 377 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 ARHGDIBP52566 201 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 OPCMLQ14982 345 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 TMEM177Q53S58 311 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 OSR1Q8TAX0 266 aaPredicted RBP13.79□□□□□ -0.2
TPM1-205ENST00000357980 RPEQ96AT9 228 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 GON7Q9BXV9 100 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.79□□□□□ -0.2
TPM1-205ENST00000357980 DPM3Q9P2X0 92 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 HSPB7Q9UBY9 170 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 WASHC3Q9Y3C0 194 aa13.79□□□□□ -0.2
TPM1-205ENST00000357980 A0A1W2PPI3 338 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 H7C2Y5 167 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 TMEM50AO95807 157 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 HKR1P10072 659 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 C4BPBP20851 252 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 RAB13P51153 203 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 TPTE2P1Q5T6R2 138 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 OR4A47Q6IF82 309 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 TET2Q6N021 2002 aaPredicted RBP13.78□□□□□ -0.2
TPM1-205ENST00000357980 UNC79Q9P2D8 2635 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 LEUTXA8MZ59 168 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 MSMBP08118 114 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 IL6RP08887 468 aaPredicted RBP13.78□□□□□ -0.2
TPM1-205ENST00000357980 MC5RP33032 325 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 TNFRSF9Q07011 255 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.78□□□□□ -0.25e-6■■■□□ 16.3
TPM1-205ENST00000357980 OR4C13Q8NGP0 309 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 LHX4Q969G2 390 aa13.78□□□□□ -0.2
TPM1-205ENST00000357980 FLYWCH2Q96CP2 140 aaKnown RBP13.78□□□□□ -0.2
TPM1-205ENST00000357980 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.2
TPM1-205ENST00000357980 CHST1O43916 411 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 TSC22D2O75157 780 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 CEACAM3P40198 252 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 P2RY1P47900 373 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 UBE2E1P51965 193 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 PAX9P55771 341 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 RELBQ01201 579 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 Q5PR19 223 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 LHFPL4Q7Z7J7 247 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 KRTAP1-3Q8IUG1 177 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 HARBI1Q96MB7 349 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 SLA2Q9H6Q3 261 aa13.77□□□□□ -0.21
TPM1-205ENST00000357980 SVEP1Q4LDE5 3571 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 TRAV3A0A0B4J244 114 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 WRBO00258 174 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 SHOXO15266 292 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 SYNGR2O43760 224 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 PVALBP20472 110 aaPredicted RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 RPL12P30050 165 aaKnown RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 OR2B8PP59922 312 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 RAB40CQ96S21 281 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 AIFM2Q9BRQ8 373 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 PDZD2O15018 2839 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 CR1P17927 2039 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 IGHV3-72A0A0B4J1Y9 119 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 A0A1W2PRD5 423 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 A0A1W2PRF3 423 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 A0A1W2PRM7 423 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 B4DSR2 109 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 RGS13O14921 159 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 BCL2L11O43521 198 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 SAA1P0DJI8 122 aaPredicted RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 PRSS57Q6UWY2 283 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 PUSL1Q8N0Z8 303 aaKnown RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 QTRT1Q9BXR0 403 aaKnown RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 LYRM2Q9NU23 88 aaPredicted RBP13.76□□□□□ -0.21
TPM1-205ENST00000357980 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
TPM1-205ENST00000357980 CSMD1Q96PZ7 3565 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 TNCP24821 2201 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 C15orf61A6NNL5 157 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 IGLV2-23P01705 113 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 UBE2KP61086 200 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
TPM1-205ENST00000357980 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
TPM1-205ENST00000357980 PDLIM3Q53GG5 364 aaPredicted RBP13.75□□□□□ -0.21
TPM1-205ENST00000357980 GPR157Q5UAW9 335 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 MOB3BQ86TA1 216 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 ZNF429Q86V71 674 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 OR8H3Q8N146 312 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 OR2C3Q8N628 320 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 OR4A16Q8NH70 328 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 MS4A7Q9GZW8 240 aaPredicted RBP13.75□□□□□ -0.21
TPM1-205ENST00000357980 RBKSQ9H477 322 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 TMEM14BQ9NUH8 114 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 HILPDAQ9Y5L2 63 aa13.75□□□□□ -0.21
TPM1-205ENST00000357980 WSB1Q9Y6I7 421 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms