RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 MMP26Q9NRE1 261 aa11.34□□□□□ -0.59
LSS-201ENST00000356396 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 SH2D7A6NKC9 451 aaPredicted RBP11.33□□□□□ -0.6
LSS-201ENST00000356396 GPR137BO60478 399 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 CGB3P0DN86 165 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 CGB7P0DN87 165 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 CAMLGP49069 296 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
LSS-201ENST00000356396 TMEM140Q9NV12 185 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 OR6C3Q9NZP0 311 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 IFNA10P01566 189 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 HSPB1P04792 205 aaKnown RBP11.33□□□□□ -0.6
LSS-201ENST00000356396 OR13C7P0DN81 318 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 RND3P61587 244 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 TNFRSF9Q07011 255 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 SWI5Q1ZZU3 235 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
LSS-201ENST00000356396 IDI2-AS1Q9NZ38 188 aa11.33□□□□□ -0.6
LSS-201ENST00000356396 A0A1B0GWJ7 208 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 TSPAN4O14817 238 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 GNB1P62873 340 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 OR10Z1Q8NGY1 313 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 FAM222BQ8WU58 562 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 NKX6-3A6NJ46 265 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 PITX3O75364 302 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 MZT1Q08AG7 82 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 LRRC10Q5BKY1 277 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 SUN5Q8TC36 379 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 DTD1Q8TEA8 209 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 GATAD1Q8WUU5 269 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 SFT2D1Q8WV19 159 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 C22orf15Q8WYQ4 148 aa11.32□□□□□ -0.6
LSS-201ENST00000356396 EIF5A2Q9GZV4 153 aaKnown RBP11.32□□□□□ -0.6
LSS-201ENST00000356396 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
LSS-201ENST00000356396 CATR1Q13166 79 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
LSS-201ENST00000356396 RUSC1-AS1Q66K80 236 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 SSMEM1Q8WWF3 244 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 FAM103A1Q9BTL3 118 aaKnown RBP11.31□□□□□ -0.6
LSS-201ENST00000356396 B9A039 149 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 LYL1P12980 280 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
LSS-201ENST00000356396 CFHR2P36980 270 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 PINX1Q96BK5 328 aaKnown RBP11.31□□□□□ -0.6
LSS-201ENST00000356396 PCGF1Q9BSM1 259 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 C11orf1Q9H5F2 150 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 LPAR3Q9UBY5 353 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 hADV38S2A0JD32 116 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 SHOXO15266 292 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 OR4A47Q6IF82 309 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 AIFM2Q9BRQ8 373 aa11.31□□□□□ -0.6
LSS-201ENST00000356396 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 ADH4P08319 380 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 ZFP36P26651 326 aaKnown RBP11.3□□□□□ -0.6
LSS-201ENST00000356396 P2RY1P47900 373 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 PATZ1Q9HBE1 687 aaKnown RBP11.3□□□□□ -0.6
LSS-201ENST00000356396 RHOFQ9HBH0 211 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 RPUSD1Q9UJJ7 312 aaKnown RBP11.3□□□□□ -0.6
LSS-201ENST00000356396 SLC25A17O43808 307 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 IGKV1D-33P01593 117 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 IGKV1-33P01594 117 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 CBLN2Q8IUK8 224 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 SPIN2AQ99865 258 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 SPIN2BQ9BPZ2 258 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
LSS-201ENST00000356396 ZFP92A6NM28 416 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 SRSF7Q16629 238 aaKnown RBP eCLIP11.29□□□□□ -0.6
LSS-201ENST00000356396 HCP5Q6MZN7 132 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 C1orf87Q8N0U7 546 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 AURKAIP1Q9NWT8 199 aaPredicted RBP11.29□□□□□ -0.6
LSS-201ENST00000356396 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 MMP24Q9Y5R2 645 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 PPIAL4CA0A0B4J2A2 164 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 VSTM5A8MXK1 200 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 YPEL1O60688 119 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 RAB2AP61019 212 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 BAXQ07812 192 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 SLC38A11Q08AI6 406 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 TMEM170AQ8WVE7 144 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 YPEL2Q96QA6 119 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 BPESC1Q9GZL8 116 aa11.29□□□□□ -0.6
LSS-201ENST00000356396 GSX1Q9H4S2 264 aaPredicted RBP11.29□□□□□ -0.6
LSS-201ENST00000356396 F8W036 122 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms