RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 SCCPDHQ8NBX0 429 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 SSBP3Q9BWW4 388 aaPredicted RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 ZNF586Q9NXT0 402 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 S100A7P31151 101 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 SPATA45Q537H7 98 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 MRPL14Q6P1L8 145 aaKnown RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 LSM10Q969L4 123 aaKnown RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 RNASE7Q9H1E1 156 aaKnown RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 DCAF16Q9NXF7 216 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 CLCF1Q9UBD9 225 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 TCFL5Q9UL49 500 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 TRBV20OR9-2A0A075B6H5 130 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 RNF212BA8MTL3 300 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 M0R1X1 148 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 PSPNO60542 156 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 LYZL6O75951 148 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 HBZP02008 142 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 ABLIM2Q6H8Q1 611 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 FAM216AQ8WUB2 273 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 IMMP1LQ96LU5 166 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 A8MXE2 369 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 C12orf77C9JDV5 145 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 KLF7O75840 302 aaPredicted RBP11.41□□□□□ -0.58
TRIM4-203ENST00000355947 CER1O95813 267 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 PRDM14Q9GZV8 571 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 ELOVL5Q9NYP7 299 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 PXMP4Q9Y6I8 212 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 DCHS1Q96JQ0 3298 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 INTS1Q8N201 2190 aaKnown RBP11.41□□□□□ -0.58
TRIM4-203ENST00000355947 IGHV3-48P01763 117 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 EPHA8P29322 1005 aaPredicted RBP11.41□□□□□ -0.58
TRIM4-203ENST00000355947 TIMP3P35625 211 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 CXCL12P48061 93 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 SOX8P57073 446 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 MAJINQ3KP22 176 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 MDP1Q86V88 176 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 TECTBQ96PL2 329 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
TRIM4-203ENST00000355947 TBL2Q9Y4P3 447 aaKnown RBP11.41□□□□□ -0.58
TRIM4-203ENST00000355947 CACNA1BQ00975 2339 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 RRHO14718 337 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 FOXH1O75593 365 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 IGLV2-14P01704 120 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 B3GALT5-AS1P59052 145 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 TMEM14EPQ6UXP3 125 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 R3HDM4Q96D70 268 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 RTL8AQ9BWD3 113 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 MUC3AQ02505 3323 aa11.41□□□□□ -0.58
TRIM4-203ENST00000355947 YLPM1P49750 1951 aaKnown RBP11.4□□□□□ -0.58
TRIM4-203ENST00000355947 MYOD1P15172 320 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 RAB4AP20338 218 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 OR2Y1Q8NGV0 311 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 KCNE4Q8WWG9 221 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 LRFN3Q9BTN0 628 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 HAND1O96004 215 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 CAMPP49913 170 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 Q56UQ5 140 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 ABHD17BQ5VST6 288 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 CNEP1R1Q8N9A8 125 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 MIEN1Q9BRT3 115 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 RNF114Q9Y508 228 aa11.4□□□□□ -0.58
TRIM4-203ENST00000355947 WNK2Q9Y3S1 2297 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 EXPH5Q8NEV8 1989 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 J3QT63 122 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 AGFG2O95081 481 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 CGAP01215 116 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 CRYBB3P26998 211 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 SRIP30626 198 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 GPR12P47775 334 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 TCTAP57738 103 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 UNQ5815/PRO19632Q6UWF5 114 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 PQLC2Q6ZP29 291 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 HSD17B10Q99714 261 aaKnown RBP11.39□□□□□ -0.59
TRIM4-203ENST00000355947 MED13LQ71F56 2210 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 KIAA1549Q9HCM3 1950 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 A0A1B0GWJ7 208 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 C20orf202A1L168 122 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 LINC00473A8K010 186 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 NEURL1O76050 574 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 PSG5Q15238 335 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 MMD2Q8IY49 270 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 CARFQ8N187 725 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 MS4A5Q9H3V2 200 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 METRNQ9UJH8 293 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 FBXL7Q9UJT9 491 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 TRAV3A0A0B4J244 114 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 DKK1O94907 266 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 OR5G3P0C626 314 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 BRS3P32247 399 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 UBE2NP61088 152 aaKnown RBP11.39□□□□□ -0.59
TRIM4-203ENST00000355947 VHLLQ6RSH7 139 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 SEPSECSQ9HD40 501 aaKnown RBP11.39□□□□□ -0.59
TRIM4-203ENST00000355947 PRDM6Q9NQX0 595 aa11.39□□□□□ -0.59
TRIM4-203ENST00000355947 OR9G9P0C7N8 305 aa11.38□□□□□ -0.59
TRIM4-203ENST00000355947 RPL39P5Q59GN2 51 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms