RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 APCDD1LQ8NCL9 501 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 DCTN5Q9BTE1 182 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 HAX1O00165 279 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 CTSSP25774 331 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 ZNF818PQ6ZRF7 136 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 DNM1P46Q6ZS02 220 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 TRAV8-6A0A0B4J262 113 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 RBMY1BA6NDE4 496 aaKnown RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 RBMY1EA6NEQ0 496 aaKnown RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 RRHO14718 337 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 CEACAM4O75871 244 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 RBMY1DP0C7P1 496 aaKnown RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 RBMY1A1P0DJD3 496 aaKnown RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 RBMY1CP0DJD4 496 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 LEAP2Q969E1 77 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 CLEC7AQ9BXN2 247 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 H7C1H1 209 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
LMX1B-201ENST00000355497 SLC25A38Q96DW6 304 aa12.74□□□□□ -0.37
LMX1B-201ENST00000355497 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 ZIC3O60481 467 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 LINC00305Q7Z4B0 112 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 GPHA2Q96T91 129 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 FOXJ2Q9P0K8 574 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 HIST1H2BAQ96A08 127 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 TNFRSF18Q9Y5U5 241 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 DPRXA6NFQ7 191 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 VKORC1L1Q8N0U8 176 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 CA7P43166 264 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 LINC00518Q8N0U6 118 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 Q96M66 194 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
LMX1B-201ENST00000355497 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 NPIPB7O75200 414 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 PTGDSP41222 190 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 FOXL2P58012 376 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 CTAG1AP78358 180 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 C2orf68Q2NKX9 166 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 TTC9CQ8N5M4 171 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 NPIPB3Q92617 1050 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 GGACTQ9BVM4 153 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-201ENST00000355497 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 C9JCJ5 164 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-201ENST00000355497 CYP2G1PQ6ZSU1 146 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 TCF23Q7RTU1 214 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 CENPVQ7Z7K6 275 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-201ENST00000355497 NEUROG1Q92886 237 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 MPTX1A8MV57 137 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 LDLRAD4O15165 306 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 ASIPP42127 132 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 KLF14Q8TD94 323 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-201ENST00000355497 VCX2Q9H322 139 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 TTC3P53804 2025 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 MOSP00540 346 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 IGKV3-20P01619 116 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 FGF5P12034 268 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
LMX1B-201ENST00000355497 NPFFR1Q9GZQ6 430 aa12.72□□□□□ -0.37
LMX1B-201ENST00000355497 H3BRM9 83 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 POC1AQ8NBT0 407 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 RNF115Q9Y4L5 304 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 ERVH48-1M5A8F1 160 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 VENTXO95231 258 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 TGFAP01135 160 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 PF4P02776 101 aa12.71□□□□□ -0.37
LMX1B-201ENST00000355497 ATP5IP56385 69 aaPredicted RBP12.71□□□□□ -0.37
LMX1B-201ENST00000355497 PSMG3Q9BT73 122 aaPredicted RBP12.71□□□□□ -0.37
LMX1B-201ENST00000355497 CBLN1P23435 193 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 UCP3P55916 312 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 TMPRSS3P57727 454 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 PNKDQ8N490 385 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 CLDND2Q8NHS1 167 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 AICDAQ9GZX7 198 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 ALS2Q96Q42 1657 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 IL6RP08887 468 aaPredicted RBP12.71□□□□□ -0.38
LMX1B-201ENST00000355497 COX5BP10606 129 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 FGF11Q92914 225 aa12.71□□□□□ -0.38
LMX1B-201ENST00000355497 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 GCM2O75603 506 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-201ENST00000355497 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
LMX1B-201ENST00000355497 C18orf15Q96N68 181 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 HOXA5P20719 270 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 PDLIM4P50479 330 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 H2BFSP57053 126 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 Q5PR19 223 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 GATAD1Q8WUU5 269 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 G6PC2Q9NQR9 355 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
LMX1B-201ENST00000355497 ZNF600Q6ZNG1 722 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms