RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 A0A1W2PPB8 328 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 KIR3DP1A8MWS1 328 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 ERVH48-1M5A8F1 160 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 FFAR1O14842 300 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 NDUFB4O95168 129 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 SRIP30626 198 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 RNF182Q8N6D2 247 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 RAMP1O60894 148 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 GUCA2AQ02747 115 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 ZNF880Q6PDB4 577 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 TIMP4Q99727 224 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.29
HTT-201ENST00000355072 CCDC168Q8NDH2 2452 aa6.96□□□□□ -1.29
HTT-201ENST00000355072 NXPH3O95157 252 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 LIPT2A6NK58 231 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 SBK3P0C264 359 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 ASAH2BP0C7U1 165 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 COL9A3Q14050 684 aaPredicted RBP6.96□□□□□ -1.3
HTT-201ENST00000355072 MISP3Q96FF7 219 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 FSCN3Q9NQT6 498 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 EFSO43281 561 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 ACYP1P07311 99 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 SNAI3Q3KNW1 292 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 ZNF260Q3ZCT1 412 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 RHOVQ96L33 236 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 OSTCQ9NRP0 149 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 ZNF77Q15935 545 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 HBDP02042 147 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 GPR183P32249 361 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 TBR1Q16650 682 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 IZUMO1RA6ND01 250 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 PLAUP00749 431 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 DEFB133Q30KQ1 61 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 LDLRAD2Q5SZI1 272 aa6.96□□□□□ -1.3
HTT-201ENST00000355072 A0A1B0GWB2 263 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 LTC4SQ16873 150 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 APCDD1LQ8NCL9 501 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 FBLN5Q9UBX5 448 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 TNFSF13O75888 250 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 VSIG8P0DPA2 414 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 LYG1Q8N1E2 194 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 SLC25A10Q9UBX3 287 aaPredicted RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 M0R2P5 195 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 MGST3O14880 152 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 FCGR3BO75015 233 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 GPR6P46095 362 aaPredicted RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 SAMD5Q5TGI4 173 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 RHNO1Q9BSD3 238 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 ST6GALNAC2Q9UJ37 374 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 RPL31P62899 125 aaKnown RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 CEACAM16Q2WEN9 425 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 TNS1Q9HBL0 1735 aaKnown RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 SPRY1O43609 319 aaPredicted RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 FGF8P55075 233 aaPredicted RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 RAE1P78406 368 aaKnown RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 SRSF1Q07955 248 aaKnown RBP eCLIP6.95□□□□□ -1.3
HTT-201ENST00000355072 C1orf194Q5T5A4 169 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 OR4D5Q8NGN0 318 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 DYNLRB2Q8TF09 96 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 TCF20Q9UGU0 1960 aaKnown RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 F8VVB4 439 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 F8VWA3 439 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 ITGB1BP1O14713 200 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 CTAG1AP78358 180 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 CLDND2Q8NHS1 167 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 FAM57AQ8TBR7 257 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 TBC1D29Q9UFV1 150 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 OSR1Q8TAX0 266 aaPredicted RBP6.95□□□□□ -1.3
HTT-201ENST00000355072 TMEM208Q9BTX3 173 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 ATP5G1P05496 136 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 ATP5G3P48201 142 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 ATP5G2Q06055 141 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 CCL14Q16627 93 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 HEPN1Q6WQI6 88 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 RNF222A6NCQ9 220 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 CACNG4Q9UBN1 327 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 FAM231BA6NCW3 169 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 FNDC10F2Z333 226 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 UMODP07911 640 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 COX14Q96I36 57 aa6.95□□□□□ -1.3
HTT-201ENST00000355072 HMGA1P17096 107 aaKnown RBP6.94□□□□□ -1.3
HTT-201ENST00000355072 SRD5A1P18405 259 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 LIMS1P48059 325 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 UBE2V1Q13404 147 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 SMIM20Q8N5G0 67 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 OR2H1Q9GZK4 316 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 TRAV8-4A0A0B4J246 113 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 CD40P25942 277 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 CACNG7P62955 275 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 MRGPRFQ96AM1 343 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 PCOLCE2Q9UKZ9 415 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 SPTY2D1-AS1A0A0U1RR47 76 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 ETHE1O95571 254 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 TMEM202A6NGA9 273 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 WTIPA6NIX2 430 aaPredicted RBP6.94□□□□□ -1.3
HTT-201ENST00000355072 TMEM177Q53S58 311 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 TMEM91Q6ZNR0 172 aa6.94□□□□□ -1.3
HTT-201ENST00000355072 TMEM252Q8N6L7 170 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms