RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SLC17A5Q9NRA2 495 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 A6NJY4 79 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 HPRT1P00492 218 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 SPSB4Q96A44 273 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 PLSCR2Q9NRY7 297 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 A0A1W2PPC1 479 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 PCP4P48539 62 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 MSRB3Q8IXL7 192 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 OR11H7Q8NGC8 314 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 SCNM1Q9BWG6 230 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 ZNF646O15015 1829 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 IGHV3-73A0A0B4J1V6 119 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 FOXS1O43638 330 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 PGA4P0DJD7 388 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 PGA5P0DJD9 388 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 EGR1P18146 543 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 VDAC2P45880 294 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 KIAA0040Q15053 153 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 CEACAM21Q3KPI0 293 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 FAM71F2Q6NXP2 309 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 PET117Q6UWS5 81 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 SCARF2Q96GP6 870 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 QTRT1Q9BXR0 403 aaKnown RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 NPVFQ9HCQ7 196 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 ANKRD36A6QL64 1941 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 HKR1P10072 659 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 CD33P20138 364 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 NFAM1Q8NET5 270 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 RARRES2Q99969 163 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 FBXL15Q9H469 300 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 OR5AC2Q9NZP5 309 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 IL19Q9UHD0 177 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 LAMB2P55268 1798 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 DOCK7Q96N67 2140 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 TCRBV4S1A1TA0A5B7 111 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 TIAF1O95411 115 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 CDX1P47902 265 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 COLCA1Q6ZS62 124 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 CYB561D1Q8N8Q1 229 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 ZNF501Q96CX3 271 aaPredicted RBP8.57□□□□□ -1.04
COL11A1-201ENST00000353414 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 SIGLEC12Q96PQ1 595 aa8.57□□□□□ -1.04
COL11A1-201ENST00000353414 AHRRA9YTQ3 701 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 ZG16O60844 167 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 S1PR2O95136 353 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
COL11A1-201ENST00000353414 RPL34P49207 117 aaKnown RBP8.56□□□□□ -1.04
COL11A1-201ENST00000353414 OR5AN1Q8NGI8 311 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 RNF133Q8WVZ7 376 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 PARLQ9H300 379 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 PILRBQ9UKJ0 227 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 TRAV21A0A0B4J279 112 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 C1QL1O75973 258 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 CRYBB3P26998 211 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 SH3BGRL3Q9H299 93 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 HEATR1Q9H583 2144 aaKnown RBP8.56□□□□□ -1.04
COL11A1-201ENST00000353414 ARAP2Q8WZ64 1704 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 IGLV3-16A0A075B6K0 115 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 TYMSP04818 313 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 FAM89BQ8N5H3 189 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 ANGPTL4Q9BY76 406 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 ST6GALNAC2Q9UJ37 374 aa8.56□□□□□ -1.04
COL11A1-201ENST00000353414 TRAV8-6A0A0B4J262 113 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 MMP16P51512 607 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 LINC00305Q7Z4B0 112 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 SLIRPQ9GZT3 109 aaKnown RBP8.55□□□□□ -1.04
COL11A1-201ENST00000353414 QSER1Q2KHR3 1735 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 WNK3Q9BYP7 1800 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 LIPFP07098 398 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 AHCTF1Q8WYP5 2266 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 IGHV4-39P01824 125 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 DMRTA1Q5VZB9 504 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 DEGS2Q6QHC5 323 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 REC114Q7Z4M0 266 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 ST6GALNAC6Q969X2 333 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 CLEC7AQ9BXN2 247 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 DSPPQ9NZW4 1301 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 C5orf67F2Z3F1 127 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 FXYD1O00168 92 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 ICAM4Q14773 271 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 STPG3Q8N7X2 389 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 CHST5Q9GZS9 411 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 LNP1A1A4G5 178 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 PSCAO43653 123 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 FAM209BQ5JX69 171 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 NPIPB3Q92617 1050 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 RAB24Q969Q5 203 aa8.55□□□□□ -1.04
COL11A1-201ENST00000353414 C7orf77A4D0Y5 90 aa8.54□□□□□ -1.04
COL11A1-201ENST00000353414 GRIFINA4D1Z8 144 aa8.54□□□□□ -1.04
COL11A1-201ENST00000353414 NANOS3P60323 173 aaKnown RBP8.54□□□□□ -1.04
COL11A1-201ENST00000353414 WDR82Q6UXN9 313 aa8.54□□□□□ -1.04
COL11A1-201ENST00000353414 TRBV7-9A0A0J9YWB2 115 aa8.54□□□□□ -1.04
COL11A1-201ENST00000353414 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
COL11A1-201ENST00000353414 PRR31Q5SQ13 230 aa8.54□□□□□ -1.04
COL11A1-201ENST00000353414 ZNF600Q6ZNG1 722 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms