RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 NANPQ8TBE9 248 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 S1PR3Q99500 378 aa18.3■□□□□ 0.52
UPF3A-201ENST00000351487 TET2Q6N021 2002 aaPredicted RBP18.3■□□□□ 0.52
UPF3A-201ENST00000351487 ZFHX4Q86UP3 3567 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 SEC14L6B5MCN3 397 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 TGOLN2O43493 480 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 OPN1MWP04001 364 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 OPN1MW2P0DN77 364 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 OPN1MW3P0DN78 364 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 VDAC2P45880 294 aaPredicted RBP18.29■□□□□ 0.52
UPF3A-201ENST00000351487 VHLLQ6RSH7 139 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 FAM210BQ96KR6 192 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 TRBV24-1A0A075B6N3 115 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 RELBQ01201 579 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 NCMAPQ5T1S8 102 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 SSX9Q7RTT3 188 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.29■□□□□ 0.52
UPF3A-201ENST00000351487 SDSLQ96GA7 329 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 GGACTQ9BVM4 153 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 GFOD1Q9NXC2 390 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 DOK5Q9P104 306 aa18.29■□□□□ 0.52
UPF3A-201ENST00000351487 SLC31A2O15432 143 aa18.28■□□□□ 0.52
UPF3A-201ENST00000351487 MPDU1O75352 247 aa18.28■□□□□ 0.52
UPF3A-201ENST00000351487 CRYABP02511 175 aaKnown RBP18.28■□□□□ 0.52
UPF3A-201ENST00000351487 CEACAM8P31997 349 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-201ENST00000351487 TLE1Q04724 770 aa18.28■□□□□ 0.52
UPF3A-201ENST00000351487 TMEM241Q24JQ0 296 aa18.28■□□□□ 0.52
UPF3A-201ENST00000351487 TMEM249Q2WGJ8 235 aa18.28■□□□□ 0.52
UPF3A-201ENST00000351487 FAM234AQ9H0X4 552 aa18.28■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BKO60814 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BJP06899 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BOP23527 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BBP33778 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 CDC34P49427 236 aaPredicted RBP18.27■□□□□ 0.52
UPF3A-201ENST00000351487 TMPRSS3P57727 454 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BDP58876 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BCP62807 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 CTAG1AP78358 180 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST2H2BEQ16778 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.27■□□□□ 0.52
UPF3A-201ENST00000351487 RBMXL3Q8N7X1 1067 aaKnown RBP18.27■□□□□ 0.52
UPF3A-201ENST00000351487 OR4S2Q8NH73 311 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 RAB1CQ92928 201 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BHQ93079 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BNQ99877 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 HIST1H2BMQ99879 126 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 TMEM140Q9NV12 185 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 RNF7Q9UBF6 113 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 KBTBD11-OT1A0A1B0GTJ5 212 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 PRSS46E5RG02 174 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 SELLP14151 372 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 CDX1P47902 265 aaPredicted RBP18.27■□□□□ 0.52
UPF3A-201ENST00000351487 STUMQ69YW2 141 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 SSX3Q99909 188 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 PARLQ9H300 379 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 IL19Q9UHD0 177 aa18.27■□□□□ 0.52
UPF3A-201ENST00000351487 RAI1Q7Z5J4 1906 aaPredicted RBP18.26■□□□□ 0.51
UPF3A-201ENST00000351487 TRGV8A0A0C4DH27 118 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 GFRA3O60609 400 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 TRGC2P03986 189 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 FAM201AQ5SY85 155 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 C1orf229Q6ZS94 237 aaPredicted RBP18.26■□□□□ 0.51
UPF3A-201ENST00000351487 VKORC1L1Q8N0U8 176 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 GCM1Q9NP62 436 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 IFNA10P01566 189 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 IGHV3-7P01780 117 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 ADIRFQ15847 76 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 CT45A1Q5HYN5 189 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 CT45A3Q8NHU0 189 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 GATAD1Q8WUU5 269 aa18.26■□□□□ 0.51
UPF3A-201ENST00000351487 RPUSD4Q96CM3 377 aaKnown RBP18.26■□□□□ 0.51
UPF3A-201ENST00000351487 SMCO3A2RU48 225 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 SELENOVP59797 346 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 RPL23P62829 140 aaKnown RBP18.25■□□□□ 0.51
UPF3A-201ENST00000351487 UTF1Q5T230 341 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 OR4F5Q8NH21 305 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 OR4F4Q96R69 305 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 HEYLQ9NQ87 328 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-201ENST00000351487 TRAV3A0A0B4J244 114 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 IGHV1-46P01743 117 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 NDUFA6P56556 154 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 TNFAIP6P98066 277 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-201ENST00000351487 BSXQ3C1V8 233 aa18.25■□□□□ 0.51
UPF3A-201ENST00000351487 CFAP47Q6ZTR5 3102 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 SAA2-SAA4A0A096LPE2 208 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 TRGV10A0A0A0MS01 117 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 C15orf61A6NNL5 157 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 A8MXE2 369 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 RRHO14718 337 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 YIF1AO95070 293 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 SAA2P0DJI9 122 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-201ENST00000351487 OPRK1P41145 380 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 B2MP61769 119 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 TREML4Q6UXN2 200 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 TCF23Q7RTU1 214 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 FAM57AQ8TBR7 257 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 NIT2Q9NQR4 276 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 TCF19Q9Y242 345 aa18.24■□□□□ 0.51
UPF3A-201ENST00000351487 IFITM10A6NMD0 228 aa18.23■□□□□ 0.51
UPF3A-201ENST00000351487 PAGE4O60829 102 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms