RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CT45A5P0DMU8 189 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 CT45A7P0DMV0 189 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 NQO2P16083 231 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 CCL3L1P16619 93 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 NFYBP25208 207 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 VDAC2P45880 294 aaPredicted RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF137PP52743 207 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 F2RL1P55085 397 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 SPCS3P61009 180 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 GNB2P62879 340 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 SRSF3P84103 164 aaKnown RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 RELBQ01201 579 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 TMEM267Q0VDI3 215 aaPredicted RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 VWC2Q2TAL6 325 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 LRRC75BQ2VPJ9 315 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 DHRS7BQ6IAN0 325 aaPredicted RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 FAM71F2Q6NXP2 309 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 CENPVQ7Z7K6 275 aaPredicted RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 ZNF429Q86V71 674 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 PUSL1Q8N0Z8 303 aaKnown RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 LYG1Q8N1E2 194 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 TMEM217Q8N7C4 229 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 OR2G3Q8NGZ4 309 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 C8orf46Q8TAG6 207 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 DTD1Q8TEA8 209 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 ST6GALNAC6Q969X2 333 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 CIB3Q96Q77 187 aaPredicted RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 QTRT1Q9BXR0 403 aaKnown RBP5.66□□□□□ -1.5
TRIM55-203ENST00000350034 HRH4Q9H3N8 390 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 RFNGQ9Y644 331 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 FLNCQ14315 2725 aa5.66□□□□□ -1.5
TRIM55-203ENST00000350034 PLCE1Q9P212 2302 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 CACNA1DQ01668 2161 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 A0A1B0GW64 132 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 C15orf62A8K5M9 175 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 FAM157AC9JC47 383 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 GPR37O15354 613 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 SCAF4O95104 1147 aaKnown RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 IFNA5P01569 189 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 IGFBP2P18065 325 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 MDKP21741 143 aaPredicted RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 GNLYP22749 145 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 GNG10P50151 68 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 ERVFRD-1P60508 538 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 ERVK-16P61578 105 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 HBG1P69891 147 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 HBG2P69892 147 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 TAGLNQ01995 201 aaKnown RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 ATP6V1FQ16864 119 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 SPANXN5Q5MJ07 72 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 SPSB3Q6PJ21 355 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 DPPA3Q6W0C5 159 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 OR5AN1Q8NGI8 311 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 NEU4Q8WWR8 484 aaPredicted RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 ZDHHC16Q969W1 377 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 RAB39BQ96DA2 213 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 PSMG3Q9BT73 122 aaPredicted RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 WDR61Q9GZS3 305 aaKnown RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 RAB1BQ9H0U4 201 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 NARFLQ9H6Q4 476 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 TMEM140Q9NV12 185 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 FOXA2Q9Y261 457 aaPredicted RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 CARHSP1Q9Y2V2 147 aaKnown RBP5.65□□□□□ -1.5
TRIM55-203ENST00000350034 TIMM9Q9Y5J7 89 aa5.65□□□□□ -1.5
TRIM55-203ENST00000350034 TANC2Q9HCD6 1990 aa5.65□□□□□ -1.51
TRIM55-203ENST00000350034 TRAV3A0A0B4J244 114 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TRAV1-1A0A0B4J248 108 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 C15orf61A6NNL5 157 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 CEBPZOSA8MTT3 80 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 LYNX1G3V0Z9 82 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 RNASEK-C17orf49H0YIS7 233 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 H0YJW9 148 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 J3QR06 171 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 UPK2O00526 184 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 SCO1O75880 301 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 CRYZL1O95825 349 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 HRASP01112 189 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 RBP4P02753 201 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 SOD3P08294 240 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 IGHV1-8P0DP01 117 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 LYNX1P0DP58 116 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 ADCYAP1P18509 176 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 M6PRP20645 277 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 SNCAP37840 140 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 UQCRFS1P47985 274 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 CAMLGP49069 296 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 FHITP49789 147 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 DVL1P1P54792 670 aaPredicted RBP5.64□□□□□ -1.51
TRIM55-203ENST00000350034 RUNX1Q01196 453 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 SLC38A11Q08AI6 406 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM177Q53S58 311 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 OR4A47Q6IF82 309 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TMEM182Q6ZP80 229 aaPredicted RBP5.64□□□□□ -1.51
TRIM55-203ENST00000350034 VKORC1L1Q8N0U8 176 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 LY6G5BQ8NDX9 201 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 LFNGQ8NES3 379 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 OR9G1Q8NH87 305 aa5.64□□□□□ -1.51
TRIM55-203ENST00000350034 H1FXQ92522 213 aaKnown RBP5.64□□□□□ -1.51
TRIM55-203ENST00000350034 TNFRSF14Q92956 283 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms