RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 G3V3Y1 287 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 ZNF816Q0VGE8 651 aaPredicted RBP11.91□□□□□ -0.5
RLIM-202ENST00000349225 KIR3DL3Q8N743 410 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 LIN7CQ9NUP9 197 aaKnown RBP11.91□□□□□ -0.5
RLIM-202ENST00000349225 OR2T8A6NH00 312 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 ZNF891A8MT65 544 aaPredicted RBP11.91□□□□□ -0.5
RLIM-202ENST00000349225 CELA3BP08861 270 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 TMEM11P17152 192 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 NTF3P20783 257 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 ARL4DP49703 201 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 RPEL1Q2QD12 228 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 ST6GALNAC6Q969X2 333 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 DLL3Q9NYJ7 618 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 MED12LQ86YW9 2145 aa11.91□□□□□ -0.5
RLIM-202ENST00000349225 C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 LINC01565O15544 149 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 ZIC3O60481 467 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 C7orf61Q8IZ16 206 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 KLHDC1Q8N7A1 406 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 EAF1Q96JC9 268 aaPredicted RBP11.9□□□□□ -0.5
RLIM-202ENST00000349225 FGF21Q9NSA1 209 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 CD207Q9UJ71 328 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 TNRC6BQ9UPQ9 1833 aaKnown RBP11.9□□□□□ -0.5
RLIM-202ENST00000349225 TNRC6AQ8NDV7 1962 aaKnown RBP11.9□□□□□ -0.5
RLIM-202ENST00000349225 FAM166BA8MTA8 275 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 DUSP3P51452 185 aaPredicted RBP11.9□□□□□ -0.5
RLIM-202ENST00000349225 SMIM15Q7Z3B0 74 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 SPACA9Q96E40 222 aaPredicted RBP11.9□□□□□ -0.5
RLIM-202ENST00000349225 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 RNASE7Q9H1E1 156 aaKnown RBP11.9□□□□□ -0.5
RLIM-202ENST00000349225 CHODLQ9H9P2 273 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 CLEC1BQ9P126 229 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 ZNF391Q9UJN7 358 aa11.9□□□□□ -0.5
RLIM-202ENST00000349225 NPIPB11E5RHQ5 1161 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 H0YJW9 148 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 STAG3L2P0CL84 134 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 STAG3L3P0CL85 134 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 TCL1AP56279 114 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 MPV17L2Q567V2 206 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 SPATA31B1PQ5VZV4 182 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 MRPL27Q9P0M9 148 aaKnown RBP11.9□□□□□ -0.51
RLIM-202ENST00000349225 WDR83OSQ9Y284 106 aa11.9□□□□□ -0.51
RLIM-202ENST00000349225 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 NCKAP5O14513 1909 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 CELA2AP08217 269 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 CX3CL1P78423 397 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 FXYD3Q14802 87 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 SEPSECSQ9HD40 501 aaKnown RBP11.89□□□□□ -0.51
RLIM-202ENST00000349225 TRAPPC2LH3BP13 241 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 FOXH1O75593 365 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 REG1AP05451 166 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 RAET1LQ5VY80 246 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 STUMQ69YW2 141 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 OR4P4Q8NGL7 312 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 PROK2Q9HC23 129 aa11.89□□□□□ -0.51
RLIM-202ENST00000349225 C19orf25Q9UFG5 118 aaPredicted RBP11.89□□□□□ -0.51
RLIM-202ENST00000349225 IGHV1OR21-1A0A087WYE8 117 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 RPL19P84098 196 aaKnown RBP11.88□□□□□ -0.51
RLIM-202ENST00000349225 CEACAM16Q2WEN9 425 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 C1orf159Q96HA4 380 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 RBM7Q9Y580 266 aaKnown RBP11.88□□□□□ -0.51
RLIM-202ENST00000349225 SDK1Q7Z5N4 2213 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 BRWD1Q9NSI6 2320 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 A0A1W2PPC4 97 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 RHBDL1O75783 438 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 SLAQ13239 276 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 CEACAM21Q3KPI0 293 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 Q56UQ5 140 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 COLCA1Q6ZS62 124 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 DOLPP1Q86YN1 238 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 OR5B3Q8NH48 314 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 FOXB1Q99853 325 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 CDC42EP3Q9UKI2 254 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 IGLV3-12A0A075B6K2 115 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 TRAV9-2A0A087WT02 112 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 VAMP5O95183 116 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 TNXAQ16473 311 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 TMEM240Q5SV17 173 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 PNKDQ8N490 385 aa11.88□□□□□ -0.51
RLIM-202ENST00000349225 TECRQ9NZ01 308 aaKnown RBP11.88□□□□□ -0.51
RLIM-202ENST00000349225 C17orf98A8MV24 154 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 C17orf112F2Z3M2 114 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 WISP2O76076 250 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 CD1BP29016 333 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 HTD2P86397 168 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 MIC13Q5XKP0 118 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 MRPL54Q6P161 138 aaKnown RBP11.87□□□□□ -0.51
RLIM-202ENST00000349225 MGST2Q99735 147 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 KIAA0100Q14667 2235 aaKnown RBP11.87□□□□□ -0.51
RLIM-202ENST00000349225 EIF4EBP1Q13541 118 aaPredicted RBP11.87□□□□□ -0.51
RLIM-202ENST00000349225 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 PIGBOS1A0A0B4J2F0 54 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 IGHV3-9P01782 118 aa11.87□□□□□ -0.51
RLIM-202ENST00000349225 CCR5P51681 352 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms