RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PSG7Q13046 419 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 VAMP3Q15836 100 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 LDLRAD2Q5SZI1 272 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 MOB1BQ7L9L4 216 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 GGNQ86UU5 652 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 BATF2Q8N1L9 274 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 SVIPQ8NHG7 77 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 WNT16Q9UBV4 365 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 CLN8Q9UBY8 286 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 RTTNQ86VV8 2226 aa8.66□□□□□ -1.02
CHRNA1-202ENST00000348749 TRAV9-2A0A087WT02 112 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 K7EN84 100 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 SLC17A3O00476 420 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 P0C879 139 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 CD1BP29016 333 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 GUSBP11Q6P575 273 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 TMEM136Q6ZRR5 245 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 MMD2Q8IY49 270 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 FGFRL1Q8N441 504 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 SPEM1Q8N4L4 309 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 RCHY1Q96PM5 261 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 TMEM204Q9BSN7 226 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
CHRNA1-202ENST00000348749 ARHGAP21Q5T5U3 1957 aa8.65□□□□□ -1.03
CHRNA1-202ENST00000348749 REV3LO60673 3130 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 IGKV3D-15A0A087WSY6 115 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 LY6G6EA0A0G2JKS1 128 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 P04436 131 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 OR10J4P0C629 311 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 DEFA4P12838 97 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 GABRA2P47869 451 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 CX3CL1P78423 397 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 HTD2P86397 168 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 TGFBR3Q03167 851 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 ST6GALNAC3Q8NDV1 305 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 BORCS7Q96B45 105 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 SMIM12Q96EX1 92 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 PHF7Q9BWX1 381 aaPredicted RBP8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 PPP1R3CQ9UQK1 317 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 U3KQA8 63 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 V9GYV3 84 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 BRWD1Q9NSI6 2320 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 A0A1W2PPV4 95 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 ZNF891A8MT65 544 aaPredicted RBP8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 HSPB6O14558 160 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 SS18L1O75177 396 aaPredicted RBP8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 NTF4P34130 210 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 ZNF718Q3SXZ3 478 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 VASH2Q86V25 355 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 OR2M7Q8NG81 312 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 OR2Y1Q8NGV0 311 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 TSKUQ8WUA8 353 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 HES4Q9HCC6 221 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 OR1A1Q9P1Q5 309 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 MED12Q93074 2177 aa8.64□□□□□ -1.03
CHRNA1-202ENST00000348749 CABIN1Q9Y6J0 2220 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 TRGV10A0A0A0MS01 117 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 TRAV38-1A0A0B4J264 116 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 LRRC30A6NM36 301 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 H0YJW9 148 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 CXCL13O43927 109 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 TOX4O94842 621 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 CXorf1O96002 111 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 HLA-DQA1P01909 254 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 FRMD6-AS1P0C7T7 363 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 STAG3L2P0CL84 134 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 STAG3L3P0CL85 134 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 TMPRSS7Q7RTY8 843 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 MRPL21Q7Z2W9 205 aaKnown RBP8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 FGFBP3Q8TAT2 258 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 NUDT11Q96G61 164 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 EAF1Q96JC9 268 aaPredicted RBP8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 CLEC7AQ9BXN2 247 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 PKIBQ9C010 78 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 FGF23Q9GZV9 251 aaPredicted RBP8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 MTCH1Q9NZJ7 389 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 IL36RNQ9UBH0 155 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 MPC1Q9Y5U8 109 aa8.63□□□□□ -1.03
CHRNA1-202ENST00000348749 J3QR06 171 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 K7ERU9 68 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 TAX1BP3O14907 124 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 MPDU1O75352 247 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 KLF7O75840 302 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 CELA2AP08217 269 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 PATE4P0C8F1 98 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 ARL14EPLP0DKL9 152 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 ZNF16P17020 682 aaPredicted RBP8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 TBR1Q16650 682 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 CLEC2AQ6UVW9 174 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 OR8I2Q8N0Y5 310 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 OR10D3Q8NH80 312 aa8.62□□□□□ -1.03
CHRNA1-202ENST00000348749 MAFAQ8NHW3 353 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms