RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SDF2L1Q9HCN8 221 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 MRPS18AQ9NVS2 196 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 NUP214P35658 2090 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 SERF2P84101 59 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 OR4F17Q8NGA8 305 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 ZPLD1Q8TCW7 415 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 MBNL3Q9NUK0 354 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 TMEM242Q9NWH2 141 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 TUBD1Q9UJT1 453 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 PILRBQ9UKJ0 227 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 COL24A1Q17RW2 1714 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 MRPS11P82912 194 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 NUP37Q8NFH4 326 aa9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF501Q96CX3 271 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-202ENST00000348513 NKX2-6A6NCS4 301 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 H7C2G1 150 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 IFITM1P13164 125 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF324BQ6AW86 544 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 LAIR2Q6ISS4 152 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 RNF222A6NCQ9 220 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF665Q9H7R5 613 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GP6Q9HCN6 339 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 F2RL2O00254 374 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 CCL25O15444 150 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 P01737 135 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 IL6RP08887 468 aaPredicted RBP9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF260Q3ZCT1 412 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 LRRC75AQ8NAA5 344 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF488Q96MN9 340 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 TMEM140Q9NV12 185 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 KLK13Q9UKR3 277 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 DLEC1Q9Y238 1755 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE12JA6NER3 117 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 FCN3O75636 299 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE7O76087 117 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE12FP0CL80 117 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE12GP0CL81 117 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE12IP0CL82 117 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 GAGE4Q13068 117 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 TTC9CQ8N5M4 171 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 IGSF23A1L1A6 192 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 BIVMQ86UB2 503 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
SMARCE1-202ENST00000348513 IGKV1-8A0A0C4DH67 115 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 F8VVB4 439 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 F8VWA3 439 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 CHST1O43916 411 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 DLX1P56177 255 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 FADS6Q8N9I5 356 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 TXNDC17Q9BRA2 123 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 CFHR5Q9BXR6 569 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 COL5A3P25940 1745 aaPredicted RBP9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 A0A1B0GU03 582 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 A8MWV9 139 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 F5H697 171 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 THY1P04216 161 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 TWIST1Q15672 202 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 LRRC75BQ2VPJ9 315 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 ATP1A1-AS1Q5TC04 95 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 ZNF441Q8N8Z8 693 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 LSM10Q969L4 123 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 EDA2RQ9HAV5 297 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 SLC52A3Q9NQ40 469 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 RNF7Q9UBF6 113 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 INSIG2Q9Y5U4 225 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 C16orf97H3BN30 126 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 NDUFB4O95168 129 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 SLC25A45Q8N413 288 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 QTRT1Q9BXR0 403 aaKnown RBP9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 ANXA10Q9UJ72 324 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 QSER1Q2KHR3 1735 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 TRBV24-1A0A075B6N3 115 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 HTN1P15515 57 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 KIR2DS2P43631 304 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 REG1BP48304 166 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 MFAP2P55001 183 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 DOLPP1Q86YN1 238 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 C1orf174Q8IYL3 243 aa9.54□□□□□ -0.88
SMARCE1-202ENST00000348513 UPK3AO75631 287 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 BTCP35070 178 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 ACTL10Q5JWF8 245 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 MS4A6AQ9H2W1 248 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 C22orf46C9J442 243 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 M0R3E3 92 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 TGFAP01135 160 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 GGTLC2Q14390 218 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 KIAA1644Q3SXP7 199 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 CD200R1LQ6Q8B3 271 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 TMEM45BQ96B21 275 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 MRPS18CQ9Y3D5 142 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 MARF1Q9Y4F3 1742 aaKnown RBP9.53□□□□□ -0.88
SMARCE1-202ENST00000348513 IGHV1-45A0A0A0MS14 117 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms