RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 TMEM127O75204 238 aa10.21□□□□□ -0.77
TRAF3-201ENST00000347662 HOXA5P20719 270 aa10.21□□□□□ -0.77
TRAF3-201ENST00000347662 ZNF275Q9NSD4 429 aaPredicted RBP10.21□□□□□ -0.77
TRAF3-201ENST00000347662 KCNE5Q9UJ90 142 aa10.21□□□□□ -0.77
TRAF3-201ENST00000347662 NKX2-6A6NCS4 301 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 EIF3GO75821 320 aaKnown RBP eCLIP10.21□□□□□ -0.78
TRAF3-201ENST00000347662 COX11Q9Y6N1 276 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 CTSDP07339 412 aaPredicted RBP10.21□□□□□ -0.78
TRAF3-201ENST00000347662 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.78
TRAF3-201ENST00000347662 TMEM50BP56557 158 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 INSL4Q14641 139 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 INS-IGF2F8WCM5 200 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 INSP01308 110 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 TRGV3P03979 118 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 NPVFQ9HCQ7 196 aa10.21□□□□□ -0.78
TRAF3-201ENST00000347662 LOC105371242A0A075B767 164 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 NDUFB4O95168 129 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 PNLIPP16233 465 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 UCNP55089 124 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 ASCL4Q6XD76 172 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 TMEM74BQ9NUR3 256 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 PARP14Q460N5 1801 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 DLEC1Q9Y238 1755 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 ATP5LO75964 103 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 FOLR2P14207 255 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 SRSF6Q13247 344 aaKnown RBP10.2□□□□□ -0.78
TRAF3-201ENST00000347662 TTC28Q96AY4 2481 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 SOCS1O15524 211 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 LHBP01229 141 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 HLA-DRB1P01911 266 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 ASAH2BP0C7U1 165 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 SFTA2Q6UW10 78 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 OR10S1Q8NGN2 331 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 PPYP01298 95 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 IGHV3-48P01763 117 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 SLC25A45Q8N413 288 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 F8WEM9 126 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 EWSR1Q01844 656 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAF3-201ENST00000347662 C3orf36Q3SXR2 165 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 ASB10Q8WXI3 467 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 SLC25A2Q9BXI2 301 aa10.2□□□□□ -0.78
TRAF3-201ENST00000347662 OPN3Q9H1Y3 402 aaPredicted RBP10.2□□□□□ -0.78
TRAF3-201ENST00000347662 CELA2AP08217 269 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 HOXA6P31267 233 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 MESTQ5EB52 335 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 SLC17A5Q9NRA2 495 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 C7orf66A4D0T2 115 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 CRHP06850 196 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 SCGB3A1Q96QR1 104 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 MRPL18Q9H0U6 180 aaKnown RBP10.19□□□□□ -0.78
TRAF3-201ENST00000347662 TLNRD1Q9H1K6 362 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
TRAF3-201ENST00000347662 CTXND1A0A1B0GTU2 59 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 TSPAN7P41732 249 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 MVDP53602 400 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 DTX2Q86UW9 622 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 PGLYRP3Q96LB9 341 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 SEMA5BQ9P283 1151 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 GATD1Q8NB37 220 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 ST6GALNAC3Q8NDV1 305 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 NRIP2Q9BQI9 281 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 PILRBQ9UKJ0 227 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 ZIC1Q15915 447 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 KIF26BQ2KJY2 2108 aa10.19□□□□□ -0.78
TRAF3-201ENST00000347662 ADAMTS7Q9UKP4 1686 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 TRGV4A0A0C4DH28 118 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 SYNGR3O43761 229 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 OR4X2Q8NGF9 303 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 MUC21A0A0G2JKD1 596 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 MUC21A0A140T8X8 626 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 CYB5R3P00387 301 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 MUC21Q5SSG8 566 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 PEAR1Q5VY43 1037 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 LYZL2Q7Z4W2 148 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 ADAD2Q8NCV1 583 aaKnown RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 FGF20Q9NP95 211 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 OR11H12B2RN74 326 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 ZNHIT1O43257 154 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 SNAI2O43623 268 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 SLC25A1P53007 311 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 MEF2BQ02080 365 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 C1QL3Q5VWW1 255 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 OR11H2Q8NH07 326 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 LAMTOR3Q9UHA4 124 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 C10orf111Q8N326 155 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 OR4D11Q8NGI4 311 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 NRXN2Q9P2S2 1712 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 ZIC3O60481 467 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 FAM3BP58499 235 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 LNP1A1A4G5 178 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 GGTLC3B5MD39 225 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 NAPSAO96009 420 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 RSPO4Q2I0M5 234 aaPredicted RBP10.18□□□□□ -0.78
TRAF3-201ENST00000347662 ATP1A1-AS1Q5TC04 95 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 CBLN2Q8IUK8 224 aa10.18□□□□□ -0.78
TRAF3-201ENST00000347662 LCN2P80188 198 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms