RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FAM157AC9JC47 383 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 FAM216AQ8WUB2 273 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 NEU1Q99519 415 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 DENND4AQ7Z401 1863 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 GDF9O60383 454 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 MRPS18BQ9Y676 258 aaKnown RBP16.76■□□□□ 0.27
HDAC4-201ENST00000345617 LAMTOR1Q6IAA8 161 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 OPN3Q9H1Y3 402 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-201ENST00000345617 EDIL3O43854 480 aa16.76■□□□□ 0.27
HDAC4-201ENST00000345617 CD200R1LQ6Q8B3 271 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 APCDD1LQ8NCL9 501 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 H0YL77 283 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 MPZL1O95297 269 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 PRSS27Q9BQR3 290 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 ECSCRQ19T08 205 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 SNRPD3P62318 126 aaKnown RBP16.75■□□□□ 0.27
HDAC4-201ENST00000345617 RUNX1Q01196 453 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 FBXW9Q5XUX1 488 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 CBLN3Q6UW01 205 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 TMEM101Q96IK0 257 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 TMSB15BA0A087X1C1 80 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 IGHV4-34P06331 123 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 ZP4Q12836 540 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 MEIG1Q5JSS6 88 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 FLRT3Q9NZU0 649 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 GPR132Q9UNW8 380 aa16.75■□□□□ 0.27
HDAC4-201ENST00000345617 HDHD3Q9BSH5 251 aaPredicted RBP16.74■□□□□ 0.27
HDAC4-201ENST00000345617 SOSTQ9BQB4 213 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 C5orf66Q9H5L9 145 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 SHISA8B8ZZ34 492 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 CCL2P13500 99 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 SHISA5Q8N114 240 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 RASL10BQ96S79 203 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 TNFRSF19Q9NS68 423 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 METTL12A8MUP2 240 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 PTGDSP41222 190 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 UCP3P55916 312 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 H2BFSP57053 126 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 KRTCAP3Q53RY4 240 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 OVOL2Q9BRP0 275 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 IGHV5-51A0A0C4DH38 117 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 BGLAPP02818 100 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 MFRPQ9BY79 579 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 CXCL16Q9H2A7 254 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 ELOVL5Q9NYP7 299 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 PLXNA3P51805 1871 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 CENPWQ5EE01 88 aa16.74■□□□□ 0.27
HDAC4-201ENST00000345617 EFNB1P98172 346 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 PRKNO60260 465 aaPredicted RBP16.73■□□□□ 0.27
HDAC4-201ENST00000345617 SHISA7A6NL88 538 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 CTGFP29279 349 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 MDP1Q86V88 176 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 NDUFAF3Q9BU61 184 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 DDB2Q92466 427 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 MGST3O14880 152 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 CXCL10P02778 98 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 PSG6Q00889 435 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 MBNL2Q5VZF2 373 aaKnown RBP16.73■□□□□ 0.27
HDAC4-201ENST00000345617 ZFAND6Q6FIF0 208 aa16.73■□□□□ 0.27
HDAC4-201ENST00000345617 A0A1B0GUT8 65 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 NPIPB13A6NJU9 1138 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 NPIPB4C9JG80 1138 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 RNF224P0DH78 156 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 YAE1D1Q9NRH1 226 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 C1orf100Q5SVJ3 147 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 LIFP15018 202 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 P2RY6Q15077 328 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 TRAV39A0A0B4J263 110 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 TSPAN2O60636 221 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 FTH1P19P0C7X4 201 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 CX3CL1P78423 397 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 DNM1P46Q6ZS02 220 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 RPL27AP46776 148 aaKnown RBP16.72■□□□□ 0.27
HDAC4-201ENST00000345617 EFNB2P52799 333 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 S100A7L2Q5SY68 101 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 TANC2Q9HCD6 1990 aa16.72■□□□□ 0.27
HDAC4-201ENST00000345617 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
HDAC4-201ENST00000345617 C2orf68Q2NKX9 166 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 VN1R4Q7Z5H5 301 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 IGHV1OR21-1A0A087WYE8 117 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 KBTBD11-OT1A0A1B0GTJ5 212 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 VEGFBP49765 207 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 GATAD1Q8WUU5 269 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 G6PC2Q9NQR9 355 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 CBLN1P23435 193 aa16.71■□□□□ 0.27
HDAC4-201ENST00000345617 PLNP26678 52 aa16.71■□□□□ 0.26
HDAC4-201ENST00000345617 PRDM13Q9H4Q3 707 aa16.71■□□□□ 0.26
HDAC4-201ENST00000345617 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.26
HDAC4-201ENST00000345617 FAM181AQ8N9Y4 354 aa16.71■□□□□ 0.26
HDAC4-201ENST00000345617 SUMO2P61956 95 aaKnown RBP16.7■□□□□ 0.26
HDAC4-201ENST00000345617 C1QL1O75973 258 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 COL10A1Q03692 680 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 GPR146Q96CH1 333 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 SLC25A2Q9BXI2 301 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 CIARTQ8N365 385 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-201ENST00000345617 APOMO95445 188 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 IGHV3-13P01766 116 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 IGHV3-7P01780 117 aa16.7■□□□□ 0.26
HDAC4-201ENST00000345617 PGFP49763 221 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms