RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 CYYR1Q96J86 154 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 ZNF714Q96N38 554 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 NPVFQ9HCQ7 196 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 HSPB1P04792 205 aaKnown RBP11.03□□□□□ -0.64
TCF3-202ENST00000344749 SPCS3P61009 180 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 PRB3Q04118 309 aaPredicted RBP11.03□□□□□ -0.64
TCF3-202ENST00000344749 RNFT1Q5M7Z0 435 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 OR1L8Q8NGR8 309 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 OR4X1Q8NH49 305 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 RAB1CQ92928 201 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 RCC1LQ96I51 464 aaKnown RBP11.03□□□□□ -0.64
TCF3-202ENST00000344749 TXN2Q99757 166 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 QTRT1Q9BXR0 403 aaKnown RBP11.03□□□□□ -0.64
TCF3-202ENST00000344749 PPP1R14DQ9NXH3 145 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 OTOGLQ3ZCN5 2332 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 CLEC3BP05452 202 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 CSN1S1P47710 185 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 FAM3BP58499 235 aaPredicted RBP11.03□□□□□ -0.64
TCF3-202ENST00000344749 SIGLECL1Q8N7X8 197 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 IL22RA2Q969J5 263 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 GINS3Q9BRX5 216 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 TCF19Q9Y242 345 aa11.03□□□□□ -0.64
TCF3-202ENST00000344749 TRBV6-7A0A0A0MS04 114 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 CDX4O14627 284 aaPredicted RBP11.02□□□□□ -0.64
TCF3-202ENST00000344749 NDUFS6O75380 124 aaKnown RBP11.02□□□□□ -0.64
TCF3-202ENST00000344749 PTBP3O95758 552 aaKnown RBP11.02□□□□□ -0.64
TCF3-202ENST00000344749 FAM87AP0C7U9 286 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 PGA5P0DJD9 388 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 GLRXP35754 106 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 Q56UQ5 140 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 SLC35E4Q6ICL7 350 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 C16orf82Q7Z2V1 217 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 LSM10Q969L4 123 aaKnown RBP11.02□□□□□ -0.64
TCF3-202ENST00000344749 GP6Q9HCN6 339 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 GSN-AS1Q9NRJ2 163 aa11.02□□□□□ -0.64
TCF3-202ENST00000344749 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.64
TCF3-202ENST00000344749 BRCA2P51587 3418 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 CD55P08174 381 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 MPZP25189 248 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 SERTM2A0A1B0GWG4 89 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 SLC25A17O43808 307 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 RAMP3O60896 148 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 PAX5Q02548 391 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 C1orf147Q96MC9 270 aaPredicted RBP11.02□□□□□ -0.65
TCF3-202ENST00000344749 RAB1BQ9H0U4 201 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 OR51M1Q9H341 326 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 WFDC1Q9HC57 220 aa11.02□□□□□ -0.65
TCF3-202ENST00000344749 CISD1Q9NZ45 108 aaKnown RBP11.02□□□□□ -0.65
TCF3-202ENST00000344749 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 SELLP14151 372 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 PAX6P26367 422 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 MRPL54Q6P161 138 aaKnown RBP11.01□□□□□ -0.65
TCF3-202ENST00000344749 LRP11Q86VZ4 500 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 OR1L4Q8NGR5 311 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 SGMS2Q8NHU3 365 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 SMIM8Q96KF7 97 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 SEBOXQ9HB31 216 aaPredicted RBP11.01□□□□□ -0.65
TCF3-202ENST00000344749 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 HSBP1O75506 76 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 MMDQ15546 238 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 ZNF124Q15973 351 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 TIMM23BQ5SRD1 257 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 MALRD1Q5VYJ5 2156 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 DNASE2O00115 360 aaPredicted RBP11.01□□□□□ -0.65
TCF3-202ENST00000344749 PSPNO60542 156 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 RSPO1Q2MKA7 263 aaPredicted RBP11.01□□□□□ -0.65
TCF3-202ENST00000344749 LINC01560Q8TB33 94 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 HIST1H2BAQ96A08 127 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 C18orf12Q96KH6 178 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 REG1AP05451 166 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 RANP62826 216 aaKnown RBP11.01□□□□□ -0.65
TCF3-202ENST00000344749 OR2T6Q8NHC8 308 aa11.01□□□□□ -0.65
TCF3-202ENST00000344749 BARX1Q9HBU1 254 aaPredicted RBP11.01□□□□□ -0.65
TCF3-202ENST00000344749 DBX1A6NMT0 343 aa11□□□□□ -0.65
TCF3-202ENST00000344749 CCL20P78556 96 aa11□□□□□ -0.65
TCF3-202ENST00000344749 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
TCF3-202ENST00000344749 WDR61Q9GZS3 305 aaKnown RBP11□□□□□ -0.65
TCF3-202ENST00000344749 ZNF586Q9NXT0 402 aa11□□□□□ -0.65
TCF3-202ENST00000344749 COL4A4P53420 1690 aaPredicted RBP11□□□□□ -0.65
TCF3-202ENST00000344749 HTTP42858 3142 aa11□□□□□ -0.65
TCF3-202ENST00000344749 IQCF6A8MYZ5 107 aa11□□□□□ -0.65
TCF3-202ENST00000344749 J3QW42 95 aa11□□□□□ -0.65
TCF3-202ENST00000344749 HOXA4Q00056 320 aaPredicted RBP11□□□□□ -0.65
TCF3-202ENST00000344749 TOMM20LQ6UXN7 152 aa11□□□□□ -0.65
TCF3-202ENST00000344749 WDR82Q6UXN9 313 aa11□□□□□ -0.65
TCF3-202ENST00000344749 SSX7Q7RTT5 188 aa11□□□□□ -0.65
TCF3-202ENST00000344749 CYTL1Q9NRR1 136 aa11□□□□□ -0.65
TCF3-202ENST00000344749 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
TCF3-202ENST00000344749 C5orf42Q9H799 3197 aa11□□□□□ -0.65
TCF3-202ENST00000344749 LAMA2P24043 3122 aaKnown RBP11□□□□□ -0.65
TCF3-202ENST00000344749 SEC14L6B5MCN3 397 aa11□□□□□ -0.65
TCF3-202ENST00000344749 CLN5O75503 358 aa11□□□□□ -0.65
TCF3-202ENST00000344749 JPT1Q9UK76 154 aa11□□□□□ -0.65
TCF3-202ENST00000344749 HELTA6NFD8 242 aa10.99□□□□□ -0.65
TCF3-202ENST00000344749 WIPF3A6NGB9 483 aa10.99□□□□□ -0.65
TCF3-202ENST00000344749 B4DEV8 164 aa10.99□□□□□ -0.65
TCF3-202ENST00000344749 CXorf1O96002 111 aa10.99□□□□□ -0.65
TCF3-202ENST00000344749 LINC00205P59089 165 aa10.99□□□□□ -0.65
TCF3-202ENST00000344749 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms