RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 ZNF471Q9BX82 626 aaPredicted RBP10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 ZC4H2Q9NQZ6 224 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 COA4Q9NYJ1 87 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 MIOXQ9UGB7 285 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 PRELID3BQ9Y3B1 194 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 MMP24Q9Y5R2 645 aa10.98□□□□□ -0.65
HERPUD1-202ENST00000344114 A0A0G2JRQ6 117 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 C17orf98A8MV24 154 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 FAM90A26D6RGX4 464 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 F5H0A9 414 aaPredicted RBP10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 M0R1X1 148 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 WRBO00258 174 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 SLC31A2O15432 143 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 GPR137BO60478 399 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 SPDEFO95238 335 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF134P52741 427 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 ID3Q02535 119 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 FOXL1Q12952 345 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 CT45A1Q5HYN5 189 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 GPR157Q5UAW9 335 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 OR8H3Q8N146 312 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 C8orf31Q8N9H6 132 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 DMBX1Q8NFW5 382 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 CT45A3Q8NHU0 189 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 NEIL1Q96FI4 390 aaPredicted RBP10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 C11orf1Q9H5F2 150 aa10.97□□□□□ -0.65
HERPUD1-202ENST00000344114 SAA2-SAA4A0A096LPE2 208 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 A0A1W2PPH5 198 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 J3QLI3 93 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 PPIHO43447 177 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 RAMP3O60896 148 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 S1PR2O95136 353 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 P0C879 139 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 SAA2P0DJI9 122 aaPredicted RBP10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 TPT1P13693 172 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 CCL3L1P16619 93 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 THBS3P49746 956 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 DLX6P56179 175 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 RAB14P61106 215 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 EIF5AP63241 154 aaKnown RBP10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 ZNF816Q0VGE8 651 aaPredicted RBP10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 TUSC1Q2TAM9 212 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 OR2B11Q5JQS5 317 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 CLLU1Q5K131 121 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 S1PR3Q99500 378 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 CACNG5Q9UF02 275 aa10.96□□□□□ -0.65
HERPUD1-202ENST00000344114 WNK2Q9Y3S1 2297 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 FAM90A9PA6NNJ1 464 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 SSSCA1O60232 199 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 PROP1O75360 226 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 MMP23AO75900 390 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 HPRT1P00492 218 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 FSHBP01225 129 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 RBP4P02753 201 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 GNG10P50151 68 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 ARHGDIBP52566 201 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 BRWD1-AS2P59051 145 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 POLR2GP62487 172 aaKnown RBP eCLIP10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 VAMP2P63027 116 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 RPL39P5Q59GN2 51 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 AVPI1Q5T686 147 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 FAM71F2Q6NXP2 309 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 ALKAL2Q6UX46 152 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 ZNF841Q6ZN19 808 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 ODF3L1Q8IXM7 274 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 LYG1Q8N1E2 194 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 LINC00311Q8N616 119 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 C8orf46Q8TAG6 207 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 NANPQ8TBE9 248 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 ZNF596Q8TC21 504 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 LEAP2Q969E1 77 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
HERPUD1-202ENST00000344114 A0A087X0M5 115 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 A0A1B0GX30 115 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 RPS10-NUDT3A0A1W2PQS6 291 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 TOR1AO14656 332 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 FCGR3BO75015 233 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 IGHV3-7P01780 117 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 GAPDHP04406 335 aaKnown RBP10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 CXorf66Q5JRM2 361 aaPredicted RBP10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 NCR3LG1Q68D85 454 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 OR2C3Q8N628 320 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 OR4S2Q8NH73 311 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 DDB2Q92466 427 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 R3HDM4Q96D70 268 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 RAB40CQ96S21 281 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 ZNF251Q9BRH9 671 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 CYTL1Q9NRR1 136 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 LYRM2Q9NU23 88 aaPredicted RBP10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 TNCP24821 2201 aa10.94□□□□□ -0.66
HERPUD1-202ENST00000344114 A0A1W2PPE3 182 aa10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 MARCH11A6NNE9 402 aa10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 MED6O75586 246 aa10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 IGHV2-5P01817 119 aa10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 G6PCP35575 357 aa10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 RPL23AP62750 156 aaKnown RBP10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 WDR25Q64LD2 544 aaPredicted RBP10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 Q6ZRM9 215 aa10.93□□□□□ -0.66
HERPUD1-202ENST00000344114 H2BFWTQ7Z2G1 175 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms