RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TMEM182Q6ZP80 229 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 SGPP2Q8IWX5 399 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 ZNF709Q8N972 641 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM116Q8NCL8 245 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 CMTM2Q8TAZ6 248 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 VN1R17PQ8TDU5 208 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 WIPF2Q8TF74 440 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 TTTY10Q9BZA0 68 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 MTHFD2LQ9H903 347 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM38BQ9NVV0 291 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 GPR132Q9UNW8 380 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 IGHV4-30-2A0A087WSY4 118 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 LOC102724200A0A096LPH7 203 aaPredicted RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 GNG7O60262 68 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 GPR137BO60478 399 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 MAS1P04201 325 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 CSN2P05814 226 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 PTNP21246 168 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 CEACAM3P40198 252 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 GABRA2P47869 451 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 FUT5Q11128 374 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 HIST2H2BDQ6DRA6 164 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 ERASQ7Z444 233 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 NRTNQ99748 197 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 LIME1Q9H400 295 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 C5orf66Q9H5L9 145 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 CENPMQ9NSP4 180 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 NAT8Q9UHE5 227 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 MRM2Q9UI43 246 aaKnown RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 MRPS28Q9Y2Q9 187 aaKnown RBP6.08□□□□□ -1.44
ZNF540-202ENST00000343599 KALRNO60229 2985 aa6.08□□□□□ -1.44
ZNF540-202ENST00000343599 A0A1B0GV50 99 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 H7BYZ3 331 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TAX1BP3O14907 124 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 HRASP01112 189 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 WDR25Q64LD2 544 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM123Q8N131 208 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 NHLRC2Q8NBF2 726 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 MARCH1Q8TCQ1 289 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 SPSB1Q96BD6 273 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 RASD2Q96D21 266 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 POM121L2Q96KW2 1035 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 AGMATQ9BSE5 352 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 ICE1Q9Y2F5 2266 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TRAV1-1A0A0B4J248 108 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 G3V3Y1 287 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 OR10J4P0C629 311 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 MALP21145 153 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 CD1BP29016 333 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM41BQ5BJD5 291 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 KLHDC1Q8N7A1 406 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TMEM217Q8N7C4 229 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 FER1L6-AS1Q8NA97 138 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 OR4P4Q8NGL7 312 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 UHRF2Q96PU4 802 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 KCNK15Q9H427 330 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 VPS13AQ96RL7 3174 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 E5RGE8 158 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 RNF223E7ERA6 249 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 HRH1P35367 487 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 SRP14P37108 136 aaKnown RBP6.07□□□□□ -1.44
ZNF540-202ENST00000343599 GPR6P46095 362 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-202ENST00000343599 GALR1P47211 349 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 LCN2P80188 198 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TCTEX1D4Q5JR98 221 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 YRDCQ86U90 279 aaKnown RBP6.07□□□□□ -1.44
ZNF540-202ENST00000343599 OR1N2Q8NGR9 330 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 ST6GALNAC6Q969X2 333 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
ZNF540-202ENST00000343599 LPAR5Q9H1C0 372 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 GPR84Q9NQS5 396 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 ZNF586Q9NXT0 402 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 NSG2Q9Y328 171 aa6.07□□□□□ -1.44
ZNF540-202ENST00000343599 TBL2Q9Y4P3 447 aaKnown RBP6.07□□□□□ -1.44
ZNF540-202ENST00000343599 IGHV1-18A0A0C4DH31 117 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 RPL23AP62750 156 aaKnown RBP6.06□□□□□ -1.44
ZNF540-202ENST00000343599 ZNF117Q03924 483 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 DCST2Q5T1A1 773 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 PRAMEF5Q5TYX0 476 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 PRAMEF6Q5VXH4 476 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 PLXDC2Q6UX71 529 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 ZIC4Q8N9L1 334 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 OR4F17Q8NGA8 305 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 Q96M85 177 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 OR4F4Q96R69 305 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 RTBDNQ9BSG5 229 aaPredicted RBP6.06□□□□□ -1.44
ZNF540-202ENST00000343599 INSIG2Q9Y5U4 225 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 PXMP4Q9Y6I8 212 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 TLN1Q9Y490 2541 aaKnown RBP6.06□□□□□ -1.44
ZNF540-202ENST00000343599 FAM230AA0A1W2PPH8 454 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 UPK3AO75631 287 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 TSPAN13O95857 204 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 HBE1P02100 147 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 CRYAAP02489 173 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 AMY1AP04745 511 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 GYPBP06028 91 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 MMP9P14780 707 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 CSNK1A1P48729 337 aa6.06□□□□□ -1.44
ZNF540-202ENST00000343599 MTCP1P56278 107 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms