RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 MARC2Q969Z3 335 aa12.94□□□□□ -0.34
MUC1-204ENST00000343256 FANCD2OSQ96PS1 177 aa12.94□□□□□ -0.34
MUC1-204ENST00000343256 PLEKHJ1Q9NW61 149 aa12.94□□□□□ -0.34
MUC1-204ENST00000343256 ZNF257Q9Y2Q1 563 aa12.94□□□□□ -0.34
MUC1-204ENST00000343256 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 C11orf94C9JXX5 98 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 TSPAN4O14817 238 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 SAA1P0DJI8 122 aaPredicted RBP12.93□□□□□ -0.34
MUC1-204ENST00000343256 YIF1BQ5BJH7 314 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 SLC25A42Q86VD7 318 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 EEF1AKMT3Q96AZ1 226 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 CENPNQ96H22 339 aaPredicted RBP12.93□□□□□ -0.34
MUC1-204ENST00000343256 PGLYRP3Q96LB9 341 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 TMEM59Q9BXS4 323 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 Q9N2K0 584 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 BABAM2Q9NXR7 383 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 GHRLQ9UBU3 117 aa12.93□□□□□ -0.34
MUC1-204ENST00000343256 PNMA8CA0A1B0GUJ8 204 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 TEX22C9J3V5 150 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 ALPLP05186 524 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 CLEC3BP05452 202 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 FCGR1AP12314 374 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 TMPRSS11AQ6ZMR5 421 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 SETD9Q8NE22 299 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 OR4A5Q8NH83 315 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 GGHQ92820 318 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 Q96MT0 163 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 UQCC2Q9BRT2 126 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 MRPS18AQ9NVS2 196 aaKnown RBP12.92□□□□□ -0.34
MUC1-204ENST00000343256 RPL36Q9Y3U8 105 aaKnown RBP12.92□□□□□ -0.34
MUC1-204ENST00000343256 ORC6Q9Y5N6 252 aa12.92□□□□□ -0.34
MUC1-204ENST00000343256 DPPA5A6NC42 116 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 MFSD2BA6NFX1 497 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 E7EUB6 86 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 EI24O14681 340 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 RPA2P15927 270 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 UNC119Q13432 240 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 RHOXF1Q8NHV9 184 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 SLC7A6OSQ96CW6 309 aaPredicted RBP12.91□□□□□ -0.34
MUC1-204ENST00000343256 DERL3Q96Q80 235 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 FYTTD1Q96QD9 318 aaKnown RBP12.91□□□□□ -0.34
MUC1-204ENST00000343256 SLC29A1Q99808 456 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 TM2D1Q9BX74 207 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 RIMS4Q9H426 269 aaPredicted RBP12.91□□□□□ -0.34
MUC1-204ENST00000343256 FGF20Q9NP95 211 aaPredicted RBP12.91□□□□□ -0.34
MUC1-204ENST00000343256 UFC1Q9Y3C8 167 aa12.91□□□□□ -0.34
MUC1-204ENST00000343256 LINC00473A8K010 186 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 SOCS1O15524 211 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 IL6RP08887 468 aaPredicted RBP12.9□□□□□ -0.34
MUC1-204ENST00000343256 RRASP10301 218 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 AREGP15514 252 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 GPR183P32249 361 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 CDK10Q15131 360 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 MMD2Q8IY49 270 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 POM121L12Q8N7R1 296 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 CCDC197Q8NCU1 140 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 APH1BQ8WW43 257 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 CLEC2DQ9UHP7 191 aa12.9□□□□□ -0.34
MUC1-204ENST00000343256 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 A0A1B0GW64 132 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 BET1O15155 118 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 GALP22466 123 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 SMN1Q16637 294 aaKnown RBP12.89□□□□□ -0.35
MUC1-204ENST00000343256 LAMTOR1Q6IAA8 161 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 Q6ZTC4 211 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 C6orf62Q9GZU0 229 aaPredicted RBP12.89□□□□□ -0.35
MUC1-204ENST00000343256 MGAT4AQ9UM21 535 aa12.89□□□□□ -0.35
MUC1-204ENST00000343256 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 CREBL2O60519 120 aaPredicted RBP12.88□□□□□ -0.35
MUC1-204ENST00000343256 REG1AP05451 166 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 UBBP0CG47 229 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 SRMP19623 302 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 DUTP33316 252 aaKnown RBP12.88□□□□□ -0.35
MUC1-204ENST00000343256 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
MUC1-204ENST00000343256 PVRIGQ6DKI7 326 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 VKORC1L1Q8N0U8 176 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 OSR1Q8TAX0 266 aaPredicted RBP12.88□□□□□ -0.35
MUC1-204ENST00000343256 DCUN1D5Q9BTE7 237 aa12.88□□□□□ -0.35
MUC1-204ENST00000343256 CA1P00915 261 aaPredicted RBP12.87□□□□□ -0.35
MUC1-204ENST00000343256 CTSDP07339 412 aaPredicted RBP12.87□□□□□ -0.35
MUC1-204ENST00000343256 GSTT2P0CG29 244 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 GSTT2BP0CG30 244 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 MYOD1P15172 320 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
MUC1-204ENST00000343256 TPBGQ13641 420 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 IGSF11Q5DX21 431 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 NR2C2APQ86WQ0 139 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 C12orf4Q9NQ89 552 aa12.87□□□□□ -0.35
MUC1-204ENST00000343256 IGLV2-18A0A075B6J9 118 aa12.86□□□□□ -0.35
MUC1-204ENST00000343256 IGHV3OR16-8A0A075B7F1 116 aa12.86□□□□□ -0.35
MUC1-204ENST00000343256 TRBV7-1A0A0A6YYK4 115 aa12.86□□□□□ -0.35
MUC1-204ENST00000343256 TRAV10A0A0B4J240 114 aa12.86□□□□□ -0.35
MUC1-204ENST00000343256 CRYGCP07315 174 aa12.86□□□□□ -0.35
MUC1-204ENST00000343256 DCKP27707 260 aa12.86□□□□□ -0.35
MUC1-204ENST00000343256 PSMB6P28072 239 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms