RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 SPATA46Q5T0L3 261 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ATP1A1-AS1Q5TC04 95 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ZNF474Q6S9Z5 364 aaPredicted RBP6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ZNF833PQ6ZTB9 187 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 C22orf34Q6ZV56 151 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 FAM234AQ9H0X4 552 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 OR6C3Q9NZP0 311 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 PPIAL4AQ9Y536 164 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 TRIOBPQ9H2D6 2365 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 RNF212BA8MTL3 300 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ZNHIT1O43257 154 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 S1PR2O95136 353 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 MYCNOSP40205 109 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 OPRK1P41145 380 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 TLE4Q04727 773 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 TMEM178AQ8NBL3 297 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 FDCSPQ8NFU4 85 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 FRZBQ92765 325 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ST6GALNAC6Q969X2 333 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ZNF414Q96IQ9 312 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 C7orf69Q9H7B7 122 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 LPAR2Q9HBW0 351 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 CUL9Q8IWT3 2517 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 TGIF2-C20orf24A0A0A6YYL0 155 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 LINC00869P0C866 280 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
CFAP54-201ENST00000342887 C4orf17Q53FE4 359 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ZNF503Q96F45 646 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 RSG1Q9BU20 258 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 ABI3Q9P2A4 366 aa6.66□□□□□ -1.34
CFAP54-201ENST00000342887 TRBV20OR9-2A0A075B6H5 130 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 WNT9BO14905 357 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 TRAPPC6AO75865 159 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 CRYABP02511 175 aaKnown RBP6.65□□□□□ -1.34
CFAP54-201ENST00000342887 CRYGBP07316 175 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 IRF2P14316 349 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 SELENOTP62341 195 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 SRSF6Q13247 344 aaKnown RBP6.65□□□□□ -1.34
CFAP54-201ENST00000342887 SLC25A24Q6NUK1 477 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 C11orf42Q8N5U0 333 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 LINC00311Q8N616 119 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 OR51H1Q8NH63 302 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 ZNF257Q9Y2Q1 563 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 SMCO3A2RU48 225 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 IFNA17P01571 189 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 TRGC1P0CF51 173 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 HNF1AP20823 631 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.34
CFAP54-201ENST00000342887 HOXA4Q00056 320 aaPredicted RBP6.65□□□□□ -1.34
CFAP54-201ENST00000342887 IZUMO4Q1ZYL8 232 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 DEFB123Q8N688 67 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 HSD17B11Q8NBQ5 300 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 OR10G9Q8NGN4 311 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 SNX22Q96L94 193 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 GAFA1Q96PS6 74 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 TMEM147Q9BVK8 224 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 MANBALQ9NQG1 85 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 LAMP3Q9UQV4 416 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 VPS13CQ709C8 3753 aa6.65□□□□□ -1.34
CFAP54-201ENST00000342887 DSPP15924 2871 aaKnown RBP6.65□□□□□ -1.34
CFAP54-201ENST00000342887 DCHS1Q96JQ0 3298 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 ELOA3CA0A087WX78 387 aaPredicted RBP6.65□□□□□ -1.35
CFAP54-201ENST00000342887 CTXND1A0A1B0GTU2 59 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 CCL25O15444 150 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 MPDU1O75352 247 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 LOXP28300 417 aaPredicted RBP6.65□□□□□ -1.35
CFAP54-201ENST00000342887 CDKN1BP46527 198 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 ASCL1P50553 236 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 TIMM23BQ5SRD1 257 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 C1orf185Q5T7R7 199 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 NOL4LQ96MY1 436 aaPredicted RBP6.65□□□□□ -1.35
CFAP54-201ENST00000342887 PSENENQ9NZ42 101 aa6.65□□□□□ -1.35
CFAP54-201ENST00000342887 PPP1R2P9O14990 202 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 SIAH2O43255 324 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 AMBPP02760 352 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 STAG3L2P0CL84 134 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 STAG3L3P0CL85 134 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 HOXB4P17483 251 aaPredicted RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 YPEL3P61236 119 aaPredicted RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ZNF788Q6ZQV5 615 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ZNF610Q8N9Z0 462 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 FAM213BQ8TBF2 198 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 MGST2Q99735 147 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ELOVL1Q9BW60 279 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 SRD5A3Q9H8P0 318 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 MED19A0JLT2 244 aaPredicted RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 C15orf61A6NNL5 157 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 M0R143 59 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 TMEM267Q0VDI3 215 aaPredicted RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 TREML4Q6UXN2 200 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 MEX3BQ6ZN04 569 aaKnown RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 SLC25A48Q6ZT89 311 aaKnown RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 OR52L2PQ8NGH6 319 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ZNF665Q9H7R5 613 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 TP53TG3Q9ULZ0 132 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ZNF292O60281 2723 aa6.64□□□□□ -1.35
CFAP54-201ENST00000342887 ZNF705GA8MUZ8 300 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms