RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 STXBP6Q8NFX7 210 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 OR5AU1Q8NGC0 362 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 OR13A1Q8NGR1 328 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 G0S2P27469 103 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 CEACAM3P40198 252 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 TNFSF10P50591 281 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 CCL20P78556 96 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 GGNQ86UU5 652 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 C18orf12Q96KH6 178 aa6.09□□□□□ -1.43
VCAN-202ENST00000342785 METTL1Q9UBP6 276 aaKnown RBP6.09□□□□□ -1.43
VCAN-202ENST00000342785 CUL9Q8IWT3 2517 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 TRAV24A0A0B4J272 114 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 IFNL4K9M1U5 179 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 CELA3BP08861 270 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 MFAP2P55001 183 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 ARL16Q0P5N6 197 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 HIST3H3Q16695 136 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 Q56UQ5 140 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 CYP2G1PQ6ZSU1 146 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 ZNF525Q8N782 197 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 MEGF10Q96KG7 1140 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 NOTCH2Q04721 2471 aa6.09□□□□□ -1.44
VCAN-202ENST00000342785 LINC00869P0C866 280 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 AGAP20933 346 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 USF1P22415 310 aaPredicted RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 C1orf185Q5T7R7 199 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 ZNF385CQ66K41 422 aaPredicted RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 FA2HQ7L5A8 372 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 IGHV3-72A0A0B4J1Y9 119 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 M0R143 59 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 CFPP27918 469 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 HTR1DP28221 377 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 GNB2P62879 340 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 RPL8P62917 257 aaKnown RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 SRSF4Q08170 494 aaKnown RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 OR1L6Q8NGR2 347 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 CA5BP1Q8WTZ4 195 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 WFDC1Q9HC57 220 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 THYN1Q9P016 225 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 FNDC1Q4ZHG4 1894 aaPredicted RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 IGHV3-21A0A0B4J1V1 117 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 ZNF714Q96N38 554 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 IGKV3D-15A0A087WSY6 115 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 CD5P06127 495 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 PKIAP61925 76 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 ACP7Q6ZNF0 438 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 PLAUP00749 431 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 CSN3P07498 182 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 COL8A1P27658 744 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 VAMP3Q15836 100 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 RPL39P5Q59GN2 51 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 C1orf147Q96MC9 270 aaPredicted RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 TUBA4BQ9H853 241 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 ZNF581Q9P0T4 197 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 GBF1Q92538 1859 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 GLRXP35754 106 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 RPL27AP46776 148 aaKnown RBP6.08□□□□□ -1.44
VCAN-202ENST00000342785 OR4D5Q8NGN0 318 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 ZDHHC16Q969W1 377 aa6.08□□□□□ -1.44
VCAN-202ENST00000342785 CEACAM18A8MTB9 384 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 SELENOTP62341 195 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 MMDQ15546 238 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 FAM201AQ5SY85 155 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 TMEM105Q8N8V8 129 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 OR1P1Q8NH06 330 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 ZNF785A8K8V0 405 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 ETV2O00321 342 aaPredicted RBP6.07□□□□□ -1.44
VCAN-202ENST00000342785 PRSS3P2Q8NHM4 247 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 PERPQ96FX8 193 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 WDYHV1Q96HA8 205 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 PAXXQ9BUH6 204 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 PLCE1Q9P212 2302 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 GNG7O60262 68 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 IGHV1-2P23083 117 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 RND2P52198 227 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 FAM209BQ5JX69 171 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 TMEM42Q69YG0 159 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 C5orf24Q7Z6I8 188 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 CLDND2Q8NHS1 167 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 TBX15Q96SF7 602 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 QTRT1Q9BXR0 403 aaKnown RBP6.07□□□□□ -1.44
VCAN-202ENST00000342785 NAPSAO96009 420 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 P01737 135 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 ARL14EPLP0DKL9 152 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 KRTCAP3Q53RY4 240 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 HCP5Q6MZN7 132 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 NPCDR1Q9BY65 106 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 SRP14P37108 136 aaKnown RBP6.07□□□□□ -1.44
VCAN-202ENST00000342785 BMPERQ8N8U9 685 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 OR2D3Q8NGH3 330 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 RAB1BQ9H0U4 201 aa6.07□□□□□ -1.44
VCAN-202ENST00000342785 AMMECR1Q9Y4X0 333 aaPredicted RBP6.07□□□□□ -1.44
VCAN-202ENST00000342785 SLC31A2O15432 143 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 SLC25A17O43808 307 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ACAA1P09110 424 aaPredicted RBP6.06□□□□□ -1.44
VCAN-202ENST00000342785 GFRA1P56159 465 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 LRP11Q86VZ4 500 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 ZMAT5Q9UDW3 170 aaKnown RBP6.06□□□□□ -1.44
VCAN-202ENST00000342785 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
VCAN-202ENST00000342785 TRPM7Q96QT4 1865 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms