RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 WDR25Q64LD2 544 aaPredicted RBP16.31■□□□□ 0.2
RTN1-202ENST00000342503 OR4A47Q6IF82 309 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 IL34Q6ZMJ4 242 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 ABHD12Q8N2K0 398 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 LILRB2Q8N423 598 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 OR9G1Q8NH87 305 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 GNPNAT1Q96EK6 184 aaPredicted RBP16.31■□□□□ 0.2
RTN1-202ENST00000342503 RHOVQ96L33 236 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 TMEM133Q9H2Q1 129 aa16.31■□□□□ 0.2
RTN1-202ENST00000342503 SPTBN1Q01082 2364 aaKnown RBP16.3■□□□□ 0.2
RTN1-202ENST00000342503 SHOXO15266 292 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 HRASP01112 189 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 PRH1P02810 166 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 CAMLGP49069 296 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 RAB5CP51148 216 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 SPCS3P61009 180 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 SLC38A11Q08AI6 406 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 PJVKQ0ZLH3 352 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 POU2AF1Q16633 256 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 OR8G2PQ6IF36 304 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 UQCC3Q6UW78 93 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 BPIFCQ8NFQ6 507 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 OR13D1Q8NGV5 346 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 OR52E5Q8NH55 327 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 CHODLQ9H9P2 273 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 NUP50Q9UKX7 468 aa16.3■□□□□ 0.2
RTN1-202ENST00000342503 PPIAL4CA0A0B4J2A2 164 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 A6NNC1 897 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 IGKV1-16P04430 117 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 PPIAL4GP0DN37 164 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 REG1BP48304 166 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 FHITP49789 147 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 F2RL1P55085 397 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 DIAPH2-AS1Q14236 149 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 DHRS7BQ6IAN0 325 aaPredicted RBP16.29■□□□□ 0.2
RTN1-202ENST00000342503 SLC25A24Q6NUK1 477 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 FAM71F2Q6NXP2 309 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 CCDC28AQ8IWP9 274 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 TMEM186Q96B77 213 aa16.29■□□□□ 0.2
RTN1-202ENST00000342503 PMS2P5A8MQ11 134 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 RPS16P62249 146 aaKnown RBP16.28■□□□□ 0.2
RTN1-202ENST00000342503 PDLIM3Q53GG5 364 aaPredicted RBP16.28■□□□□ 0.2
RTN1-202ENST00000342503 LYPD6BQ8NI32 183 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 C8orf46Q8TAG6 207 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 ST6GALNAC6Q969X2 333 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 A0A1W2PPH5 198 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 C15orf61A6NNL5 157 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 H0YJW9 148 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 APOA2P02652 100 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 SRSF3P84103 164 aaKnown RBP16.28■□□□□ 0.2
RTN1-202ENST00000342503 ZNF616Q08AN1 781 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 TUSC1Q2TAM9 212 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 ZNF429Q86V71 674 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 THNSL2Q86YJ6 484 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 SCGB1C1Q8TD33 95 aa16.28■□□□□ 0.2
RTN1-202ENST00000342503 IGSF10Q6WRI0 2623 aa16.27■□□□□ 0.2
RTN1-202ENST00000342503 ACACBO00763 2458 aa16.27■□□□□ 0.2
RTN1-202ENST00000342503 SRRM4A7MD48 611 aaKnown RBP16.27■□□□□ 0.19
RTN1-202ENST00000342503 TRIM77I1YAP6 450 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 ZNF137PP52743 207 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 DLX1P56177 255 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 AKR1C1Q04828 323 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 OR5AN1Q8NGI8 311 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 FAM213BQ8TBF2 198 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 NABP2Q9BQ15 211 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 FOXA2Q9Y261 457 aaPredicted RBP16.27■□□□□ 0.19
RTN1-202ENST00000342503 DCHS2Q6V1P9 2916 aa16.27■□□□□ 0.19
RTN1-202ENST00000342503 UMAD1C9J7I0 102 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 H7C2Y5 167 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 NDUFS7O75251 213 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 IL6RP08887 468 aaPredicted RBP16.26■□□□□ 0.19
RTN1-202ENST00000342503 VDAC2P45880 294 aaPredicted RBP16.26■□□□□ 0.19
RTN1-202ENST00000342503 TAGLNQ01995 201 aaKnown RBP16.26■□□□□ 0.19
RTN1-202ENST00000342503 LRRC75BQ2VPJ9 315 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 LY6G5BQ8NDX9 201 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 CLCC1Q96S66 551 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 NARFLQ9H6Q4 476 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 PATZ1Q9HBE1 687 aaKnown RBP16.26■□□□□ 0.19
RTN1-202ENST00000342503 TCF19Q9Y242 345 aa16.26■□□□□ 0.19
RTN1-202ENST00000342503 IGHV2-26A0A0B4J1V2 119 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 C15orf62A8K5M9 175 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 AGPAT2O15120 278 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 LY86O95711 162 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 F12P00748 615 aaPredicted RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 ARG1P05089 322 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 GNB2P62879 340 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 NARS2Q96I59 477 aaKnown RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 RSG1Q9BU20 258 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 PARD6GQ9BYG4 376 aaPredicted RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 TMEM14BQ9NUH8 114 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 MALRD1Q5VYJ5 2156 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 UBE2L5PA0A1B0GUS4 154 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 C22orf46C9J442 243 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 UPK2O00526 184 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 TSPAN15O95858 294 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 RBP4P02753 201 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 IL3RAP26951 378 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 PRB3Q04118 309 aaPredicted RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 ATP6V1FQ16864 119 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 OR10P1Q8NGE3 313 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms