RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 OR4S2Q8NH73 311 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 P2RX4Q99571 388 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 COL4A4P53420 1690 aaPredicted RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 DOLPP1Q86YN1 238 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 ZNF645Q8N7E2 425 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 ZPBPQ9BS86 351 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 SLC45A2Q9UMX9 530 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 CDH23Q9H251 3354 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 H3BTX0 84 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 J3QR06 171 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 RRHO14718 337 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 SLC25A5P05141 298 aaKnown RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 GATA2P23769 480 aaPredicted RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 CRYBB3P26998 211 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 OR10J1P30954 320 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 CCL8P80075 99 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 PRR31Q5SQ13 230 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 KDF1Q8NAX2 398 aaPredicted RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 SSBP3Q9BWW4 388 aaPredicted RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 C20orf202A1L168 122 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 GZMHP20718 246 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 CFPP27918 469 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 ZNF137PP52743 207 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 RANP62826 216 aaKnown RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 TRIP6Q15654 476 aaKnown RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 Q56UQ5 140 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FAM53AQ6NSI3 398 aaPredicted RBP10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 CDPF1Q6NVV7 123 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 HIST3H2BBQ8N257 126 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 NPCDR1Q9BY65 106 aa10.51□□□□□ -0.73
SNRNP48-201ENST00000342415 FOLR2P14207 255 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 CHRNB4P30926 498 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 MFAP2P55001 183 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 CYP2G1PQ6ZSU1 146 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 SLC24A4Q8NFF2 622 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 NKX6-3A6NJ46 265 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 DIRC3C9JPN6 131 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 CXorf1O96002 111 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 USF1P22415 310 aaPredicted RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 NTF4P34130 210 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 STARD6P59095 220 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 ARL16Q0P5N6 197 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 LRTM2Q8N967 370 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 NPVFQ9HCQ7 196 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 IGHV3-72A0A0B4J1Y9 119 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 PRB4P10163 310 aaPredicted RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 LYL1P12980 280 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 ARL3P36405 182 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 RPL31P62899 125 aaKnown RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 TNFAIP6P98066 277 aaPredicted RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 HERPUD1Q15011 391 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 LSM10Q969L4 123 aaKnown RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 NOL4LQ96MY1 436 aaPredicted RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 MRPL18Q9H0U6 180 aaKnown RBP10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 ZNF355PQ9NSJ1 428 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 FOXJ2Q9P0K8 574 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 CACNA1AO00555 2505 aa10.5□□□□□ -0.73
SNRNP48-201ENST00000342415 CT45A6P0DMU7 189 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CT45A5P0DMU8 189 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CT45A7P0DMV0 189 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 SUB1P53999 127 aaKnown RBP eCLIP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 KLF3P57682 345 aaPredicted RBP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CT45A1Q5HYN5 189 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CT45A3Q8NHU0 189 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 ZNF71Q9NQZ8 489 aaPredicted RBP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 IGLV3-32A0A0A0MS00 114 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CBY3A6NI87 242 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CEACAM18A8MTB9 384 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 NKX2-8O15522 239 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 OTX1P32242 354 aaPredicted RBP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 GPX4P36969 197 aaPredicted RBP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 PSG7Q13046 419 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 OR13A1Q8NGR1 328 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 CCL13Q99616 98 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 WIPI2Q9Y4P8 454 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 SCO2A0A1W2PP80 73 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 TCF21O43680 179 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 PTTG1IPP53801 180 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 HIST3H3Q16695 136 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 NMSQ5H8A3 153 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 GGNQ86UU5 652 aa10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 PSMG3Q9BT73 122 aaPredicted RBP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 OPN3Q9H1Y3 402 aaPredicted RBP10.49□□□□□ -0.73
SNRNP48-201ENST00000342415 A0A087WWC5 75 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 MPV17P39210 176 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 ABLIM2Q6H8Q1 611 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 OR1B1Q8NGR6 318 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 VPS25Q9BRG1 176 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 DERL1Q9BUN8 251 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 GTF3C1Q12789 2109 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 LINC00596Q86U02 117 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 TMEM105Q8N8V8 129 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 ST6GALNAC3Q8NDV1 305 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
SNRNP48-201ENST00000342415 TMEM140Q9NV12 185 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms