RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 IGHV1-69P01742 117 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 OPN1MWP04001 364 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 GAPDHP04406 335 aaKnown RBP11.17□□□□□ -0.62
PMS1-201ENST00000342075 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
PMS1-201ENST00000342075 OPN1MW2P0DN77 364 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 OPN1MW3P0DN78 364 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 IL3RAP26951 378 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 OR4S2Q8NH73 311 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 CFHR4Q92496 578 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 HARBI1Q96MB7 349 aa11.17□□□□□ -0.62
PMS1-201ENST00000342075 AMMECR1Q9Y4X0 333 aaPredicted RBP11.17□□□□□ -0.62
PMS1-201ENST00000342075 H0YIZ8 118 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 IFNA21P01568 189 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 ZBTB8BQ8NAP8 495 aaPredicted RBP11.16□□□□□ -0.62
PMS1-201ENST00000342075 RHOVQ96L33 236 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 SHOXO15266 292 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 HPRT1P00492 218 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 TCTE3Q8IZS6 198 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 FAM216AQ8WUB2 273 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 C2orf50Q96LR7 162 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 TMEM140Q9NV12 185 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 OR5AC2Q9NZP5 309 aa11.16□□□□□ -0.62
PMS1-201ENST00000342075 LSM5Q9Y4Y9 91 aaKnown RBP11.16□□□□□ -0.62
PMS1-201ENST00000342075 IGKV1D-33P01593 117 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 IGKV1-33P01594 117 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 MBPP02686 304 aaPredicted RBP11.15□□□□□ -0.62
PMS1-201ENST00000342075 P0C879 139 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 SRPXP78539 464 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 PJVKQ0ZLH3 352 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 RTL8BQ17RB0 113 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 GPR157Q5UAW9 335 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 OR4A47Q6IF82 309 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 RRNAD1Q96FB5 475 aaKnown RBP11.15□□□□□ -0.62
PMS1-201ENST00000342075 TMED3Q9Y3Q3 217 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 APOA2P02652 100 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
PMS1-201ENST00000342075 F2RL1P55085 397 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 RPS16P62249 146 aaKnown RBP11.15□□□□□ -0.62
PMS1-201ENST00000342075 IL15RAQ13261 267 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 ZFP69Q49AA0 526 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 PLEKHA2Q9HB19 425 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
PMS1-201ENST00000342075 VENTXO95231 258 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 SNRNP70P08621 437 aaKnown RBP11.14□□□□□ -0.63
PMS1-201ENST00000342075 EIF2B2P49770 351 aaKnown RBP11.14□□□□□ -0.63
PMS1-201ENST00000342075 HES1Q14469 280 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 H2BFWTQ7Z2G1 175 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 OR4D5Q8NGN0 318 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 IL22RA2Q969J5 263 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
PMS1-201ENST00000342075 ADTRPQ96IZ2 230 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 FXYD6-FXYD2A0A087WZ82 144 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 SLC25A17O43808 307 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 OR2F2O95006 317 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 IGLV2-23P01705 113 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
PMS1-201ENST00000342075 MIDNQ504T8 468 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 CYB5R2Q6BCY4 276 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 QTRT1Q9BXR0 403 aaKnown RBP11.14□□□□□ -0.63
PMS1-201ENST00000342075 MBD2Q9UBB5 411 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 RBMXL2O75526 392 aaKnown RBP11.14□□□□□ -0.63
PMS1-201ENST00000342075 MPC2O95563 127 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 NQO2P16083 231 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 RAP2BP61225 183 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 CLEC9AQ6UXN8 241 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 CD300LFQ8TDQ1 290 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 CLCC1Q96S66 551 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 MS4A7Q9GZW8 240 aaPredicted RBP11.14□□□□□ -0.63
PMS1-201ENST00000342075 PLSCR3Q9NRY6 295 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 MMP24Q9Y5R2 645 aa11.14□□□□□ -0.63
PMS1-201ENST00000342075 RBFOX2O43251 390 aaKnown RBP eCLIP11.13□□□□□ -0.63
PMS1-201ENST00000342075 GZMKP49863 264 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 C10orf55Q5SWW7 151 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 OR1S1Q8NH92 325 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 NMES1Q9C002 83 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 RCL1Q9Y2P8 373 aaKnown RBP11.13□□□□□ -0.63
PMS1-201ENST00000342075 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
PMS1-201ENST00000342075 CEACAM3P40198 252 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 Q71RC1 249 aaPredicted RBP11.13□□□□□ -0.63
PMS1-201ENST00000342075 OR4C13Q8NGP0 309 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 RNF126Q9BV68 326 aa11.13□□□□□ -0.63
PMS1-201ENST00000342075 SSSCA1O60232 199 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 B3GALNT1O75752 331 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 KIR2DS2P43631 304 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 AP2S1P53680 142 aaPredicted RBP11.12□□□□□ -0.63
PMS1-201ENST00000342075 SRSF4Q08170 494 aaKnown RBP11.12□□□□□ -0.63
PMS1-201ENST00000342075 SMCO1Q147U7 214 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 TMEM219Q86XT9 240 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 PDPNQ86YL7 162 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
PMS1-201ENST00000342075 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
PMS1-201ENST00000342075 E7EUB6 86 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 H3BP45 60 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 K7EPK0 472 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 PITX3O75364 302 aa11.12□□□□□ -0.63
PMS1-201ENST00000342075 TMEM50AO95807 157 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms