RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ZNF114Q8NC26 417 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 HSPB7Q9UBY9 170 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
CPSF7-201ENST00000340437 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 IGHV1-2P23083 117 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 HOXA6P31267 233 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 ACOT6Q3I5F7 207 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-201ENST00000340437 KCNIP4Q6PIL6 250 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 TMEM242Q9NWH2 141 aa12.04□□□□□ -0.48
CPSF7-201ENST00000340437 Q8IYB0 196 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 DEFB108BQ8NET1 73 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 SGMS2Q8NHU3 365 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 KLF13Q9Y2Y9 288 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-201ENST00000340437 CD1BP29016 333 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 BRWD1-AS2P59051 145 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 COQ2Q96H96 371 aa12.03□□□□□ -0.48
CPSF7-201ENST00000340437 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-201ENST00000340437 TRAV3A0A0B4J244 114 aa12.02□□□□□ -0.48
CPSF7-201ENST00000340437 OOEPA6NGQ2 149 aa12.02□□□□□ -0.48
CPSF7-201ENST00000340437 AQP7O14520 342 aa12.02□□□□□ -0.48
CPSF7-201ENST00000340437 ZNF766Q5HY98 468 aa12.02□□□□□ -0.48
CPSF7-201ENST00000340437 DEFB124Q8NES8 71 aa12.02□□□□□ -0.48
CPSF7-201ENST00000340437 OR2Z1Q8NG97 314 aa12.02□□□□□ -0.48
CPSF7-201ENST00000340437 MLNRO43193 412 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 MBP02144 154 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 GNB1P62873 340 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 JOSD1Q15040 202 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-201ENST00000340437 FAM201AQ5SY85 155 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 TGIF2LXQ8IUE1 241 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 LRRC29Q8WV35 223 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 TMEM18Q96B42 140 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 CBLN4Q9NTU7 201 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 TNCP24821 2201 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 ATMQ13315 3056 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-201ENST00000340437 SLC17A3O00476 420 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 RRHO14718 337 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 TGOLN2O43493 480 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 SS18L1O75177 396 aaPredicted RBP12.02□□□□□ -0.49
CPSF7-201ENST00000340437 ARL14EPLP0DKL9 152 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 BATFQ16520 125 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 LURAP1Q96LR2 239 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 PCSK5Q92824 1860 aa12.02□□□□□ -0.49
CPSF7-201ENST00000340437 MDFIC2A0A1B0GVS7 189 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 IL3RAP26951 378 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 SOX8P57073 446 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 SLC35B1P78383 322 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 CYB5R2Q6BCY4 276 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 F6UZH7 168 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 CD82P27701 267 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 GCH1P30793 250 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 MBNL3Q9NUK0 354 aaKnown RBP12.01□□□□□ -0.49
CPSF7-201ENST00000340437 CFAP47Q6ZTR5 3102 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 SPINT2O43291 252 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 MYOD1P15172 320 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 KITLGP21583 273 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 ERVK11-1P61568 191 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 MANBALQ9NQG1 85 aa12.01□□□□□ -0.49
CPSF7-201ENST00000340437 SCO2A0A1W2PP80 73 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 NKX2-8O15522 239 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 CNN1P51911 297 aaKnown RBP12□□□□□ -0.49
CPSF7-201ENST00000340437 FOXF2Q12947 444 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 ZNF146Q15072 292 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 VWA1Q6PCB0 445 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 ZNF705AQ6ZN79 300 aaPredicted RBP12□□□□□ -0.49
CPSF7-201ENST00000340437 ZNRF1Q8ND25 227 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 WIPI2Q9Y4P8 454 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 NOTCH3Q9UM47 2321 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 NUPR1O60356 82 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 CLDN14O95500 239 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 PAX5Q02548 391 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 ATP6V1FQ16864 119 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 UBALD2Q8IYN6 164 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 ZDHHC11Q9H8X9 412 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 OR6C3Q9NZP0 311 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 INTS1Q8N201 2190 aaKnown RBP12□□□□□ -0.49
CPSF7-201ENST00000340437 RAB4BP61018 213 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 ZNF90Q03938 601 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 CIB3Q96Q77 187 aaPredicted RBP12□□□□□ -0.49
CPSF7-201ENST00000340437 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
CPSF7-201ENST00000340437 GCM1Q9NP62 436 aa12□□□□□ -0.49
CPSF7-201ENST00000340437 FAM90A26D6RGX4 464 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 RPL29P47914 159 aaKnown RBP11.99□□□□□ -0.49
CPSF7-201ENST00000340437 ASPHD1Q5U4P2 390 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 SPATA31B1PQ5VZV4 182 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 TAAR6Q96RI8 345 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 HIPK2Q9H2X6 1198 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 CACNA1AO00555 2505 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 DCHS1Q96JQ0 3298 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 C15orf62A8K5M9 175 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 SELLP14151 372 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 CBLN1P23435 193 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 ACP1P24666 158 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 ERVK-16P61578 105 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 DEFB109BQ30KR1 87 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms