RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 OR4D5Q8NGN0 318 aa6.31□□□□□ -1.4
TMC1-202ENST00000340019 OSR1Q8TAX0 266 aaPredicted RBP6.31□□□□□ -1.4
TMC1-202ENST00000340019 PPP1R1CQ8WVI7 109 aa6.31□□□□□ -1.4
TMC1-202ENST00000340019 RANBP3Q9H6Z4 567 aaPredicted RBP6.31□□□□□ -1.4
TMC1-202ENST00000340019 HILPDAQ9Y5L2 63 aa6.31□□□□□ -1.4
TMC1-202ENST00000340019 ANK3Q12955 4377 aaKnown RBP6.31□□□□□ -1.4
TMC1-202ENST00000340019 TRAV14DV4A0A0A6YYC5 116 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 A0A1B0GU03 582 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 C1QBP02746 253 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 IL6RP08887 468 aaPredicted RBP6.3□□□□□ -1.4
TMC1-202ENST00000340019 SSX2Q16385 188 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 IZUMO4Q1ZYL8 232 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 VKORC1L1Q8N0U8 176 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 OR4C13Q8NGP0 309 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 RRNAD1Q96FB5 475 aaKnown RBP6.3□□□□□ -1.4
TMC1-202ENST00000340019 SPIN2AQ99865 258 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 SPIN2BQ9BPZ2 258 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 COA4Q9NYJ1 87 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 MYO9AB2RTY4 2548 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 IGHV3-72A0A0B4J1Y9 119 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 H7C2Y5 167 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 TIMM23O14925 209 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 PAX6P26367 422 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 RUSC1-AS1Q66K80 236 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 CCDC144NLQ6NUI1 221 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 MOB3BQ86TA1 216 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 OR11H4Q8NGC9 324 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 FLYWCH2Q96CP2 140 aaKnown RBP6.3□□□□□ -1.4
TMC1-202ENST00000340019 RITA1Q96K30 269 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 GSKIPQ9P0R6 139 aa6.3□□□□□ -1.4
TMC1-202ENST00000340019 ZMAT5Q9UDW3 170 aaKnown RBP6.3□□□□□ -1.4
TMC1-202ENST00000340019 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 HRASP01112 189 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 IGLV2-23P01705 113 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 S100A1P23297 94 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 CD1BP29016 333 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 ARHGDIBP52566 201 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 SMCO1Q147U7 214 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 GPR157Q5UAW9 335 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 RHOVQ96L33 236 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 CACNG5Q9UF02 275 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 OTOGQ6ZRI0 2925 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 IGHV3OR16-10A0A075B7F0 116 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 MPC2O95563 127 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 FSHBP01225 129 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 OR9G9P0C7N8 305 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 PSMB6P28072 239 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 CTAG1AP78358 180 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 FGL1Q08830 312 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 RAB32Q13637 225 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 ZFP69Q49AA0 526 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 AARDQ4LEZ3 155 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 OR4A47Q6IF82 309 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 BRD3OSQ6XYD6 125 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 H2BFWTQ7Z2G1 175 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 DMBX1Q8NFW5 382 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 RNASE11Q8TAA1 199 aaKnown RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 HARBI1Q96MB7 349 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 TMEM140Q9NV12 185 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 CSPG4Q6UVK1 2322 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 NOTCH2Q04721 2471 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 TET2Q6N021 2002 aaPredicted RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 H0YIZ8 118 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 SHOXO15266 292 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 VENTXO95231 258 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 MBPP02686 304 aaPredicted RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 ERVK-16P61578 105 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 ID3Q02535 119 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 EBI3Q14213 229 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 LRRC37A5PQ49AS3 106 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 CXorf66Q5JRM2 361 aaPredicted RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 SSX9Q7RTT3 188 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 NOXA1Q86UR1 476 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 PUSL1Q8N0Z8 303 aaKnown RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 AIFM2Q9BRQ8 373 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 RNF126Q9BV68 326 aa6.29□□□□□ -1.4
TMC1-202ENST00000340019 MS4A7Q9GZW8 240 aaPredicted RBP6.29□□□□□ -1.4
TMC1-202ENST00000340019 BAHCC1Q9P281 2608 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 TRAV3A0A0B4J244 114 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 SMAD7O15105 426 aaKnown RBP6.28□□□□□ -1.4
TMC1-202ENST00000340019 SAA1P0DJI8 122 aaPredicted RBP6.28□□□□□ -1.4
TMC1-202ENST00000340019 LYL1P12980 280 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 LGALS7P47929 136 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 RELBQ01201 579 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 FBLN7Q53RD9 439 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 C11orf87Q6NUJ2 197 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 RNF5Q99942 180 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 MEGF9Q9H1U4 602 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 BET1LQ9NYM9 111 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 TNCP24821 2201 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 A0A0U1RQK1 487 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 K7EPK0 472 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 CRYGBP07316 175 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 SLC25A4P12235 298 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
TMC1-202ENST00000340019 BPIFB3P59826 476 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 UBE2KP61086 200 aa6.28□□□□□ -1.4
TMC1-202ENST00000340019 RPS16P62249 146 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms