RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ABHD12Q8N2K0 398 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 OR8B3Q8NGG8 313 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 MARC2Q969Z3 335 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 OR8B2Q96RD0 313 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 SLC35D1Q9NTN3 355 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 EPG5Q9HCE0 2579 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 FSTL3O95633 263 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 RNF224P0DH78 156 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 ZP3P21754 424 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 OR4A47Q6IF82 309 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 RAB39BQ96DA2 213 aa18.29■□□□□ 0.52
PDLIM2-203ENST00000339162 PPIAL4CA0A0B4J2A2 164 aa18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 A6NNC1 897 aa18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 PPIAL4GP0DN37 164 aa18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 OR2G3Q8NGZ4 309 aa18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 SAT2Q96F10 170 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 NEIL1Q96FI4 390 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 MYO18BQ8IUG5 2567 aa18.28■□□□□ 0.52
PDLIM2-203ENST00000339162 TMEM14EPQ6UXP3 125 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 OR13D1Q8NGV5 346 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 MIOXQ9UGB7 285 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 ARHGAP32A7KAX9 2087 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 SRRM4A7MD48 611 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 H7C2Y5 167 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 AGPAT2O15120 278 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 PRH1P02810 166 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 SRSF3P84103 164 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 SLC25A24Q6NUK1 477 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 LILRB2Q8N423 598 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 EIF4E3Q8N5X7 224 aaKnown RBP18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 TMEM133Q9H2Q1 129 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 CHODLQ9H9P2 273 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 CACFD1Q9UGQ2 172 aa18.27■□□□□ 0.52
PDLIM2-203ENST00000339162 MYOD1P15172 320 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 RTL8BQ17RB0 113 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 ZNF525Q8N782 197 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 OR9G1Q8NH87 305 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 C22orf46C9J442 243 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 ZNF616Q08AN1 781 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 STPG2Q8N412 459 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 STRAPQ9Y3F4 350 aaKnown RBP18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 ZNF462Q96JM2 2506 aa18.26■□□□□ 0.51
PDLIM2-203ENST00000339162 A0A087X0M5 115 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 A0A1B0GX30 115 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 DFFBO76075 338 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 HBG1P69891 147 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 HBG2P69892 147 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 HNF4GQ14541 408 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 THNSL2Q86YJ6 484 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 TET2Q6N021 2002 aaPredicted RBP18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 FAM90A9PA6NNJ1 464 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 IFNA5P01569 189 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 CAMLGP49069 296 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 BLOC1S1P78537 153 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 SLC38A11Q08AI6 406 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 TUSC1Q2TAM9 212 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 NARS2Q96I59 477 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 TMEM231Q9H6L2 316 aa18.25■□□□□ 0.51
PDLIM2-203ENST00000339162 UTP20O75691 2785 aaKnown RBP18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 H0YJW9 148 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 HRASP01112 189 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 GNB2P62879 340 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 LINC00311Q8N616 119 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 BPIFCQ8NFQ6 507 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 ZNF596Q8TC21 504 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 ST6GALNAC6Q969X2 333 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 RSG1Q9BU20 258 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 PARP11Q9NR21 331 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 MMP26Q9NRE1 261 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 ONECUT1Q9UBC0 465 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 DOPEY1Q5JWR5 2465 aa18.24■□□□□ 0.51
PDLIM2-203ENST00000339162 A0A1B0GV50 99 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 KRBOX1C9JBD0 128 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 GPR37O15354 613 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 COX7A1P24310 79 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 SPCS3P61009 180 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 AARDQ4LEZ3 155 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 BTNL8Q6UX41 500 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 FAM213BQ8TBF2 198 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 CIB3Q96Q77 187 aaPredicted RBP18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 FBXO7Q9Y3I1 522 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 IGHV2-26A0A0B4J1V2 119 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 OPN1MWP04001 364 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 OPN1MW2P0DN77 364 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 OPN1MW3P0DN78 364 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 TMEM186Q96B77 213 aa18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 TSNAXQ99598 290 aaKnown RBP18.23■□□□□ 0.51
PDLIM2-203ENST00000339162 C15orf61A6NNL5 157 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 PMS2P5A8MQ11 134 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 C8orf31Q8N9H6 132 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 OR5AN1Q8NGI8 311 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 NABP2Q9BQ15 211 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 PATZ1Q9HBE1 687 aaKnown RBP18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 TCF19Q9Y242 345 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 UBE2L5PA0A1B0GUS4 154 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 APOA2P02652 100 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 PJVKQ0ZLH3 352 aa18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 GNPNAT1Q96EK6 184 aaPredicted RBP18.22■□□□□ 0.51
PDLIM2-203ENST00000339162 HEYLQ9NQ87 328 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms