RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 ODF3BA8MYP8 253 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 E5RGE8 158 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 LY6LH3BQJ8 138 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 SHOXO15266 292 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 OR9G9P0C7N8 305 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 MIDNQ504T8 468 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 LDLRAD2Q5SZI1 272 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 LHFPL4Q7Z7J7 247 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 FLYWCH2Q96CP2 140 aaKnown RBP11.89□□□□□ -0.51
CBX3-201ENST00000337620 MBD6Q96DN6 1003 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 TMEM140Q9NV12 185 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 HILPDAQ9Y5L2 63 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 CHST1O43916 411 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 MSMBP08118 114 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 S100A11P31949 105 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 MC5RP33032 325 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 CEACAM3P40198 252 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 LGALS4P56470 323 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 TPTE2P1Q5T6R2 138 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 PDPNQ86YL7 162 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 ZC4H2Q9NQZ6 224 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 WASHC3Q9Y3C0 194 aa11.89□□□□□ -0.51
CBX3-201ENST00000337620 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 A0A0D9SG52 128 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 SRRM4A7MD48 611 aaKnown RBP11.88□□□□□ -0.51
CBX3-201ENST00000337620 B4DSR2 109 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 RNF223E7ERA6 249 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 TXNL1O43396 289 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 OR2F2O95006 317 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 PVALBP20472 110 aaPredicted RBP11.88□□□□□ -0.51
CBX3-201ENST00000337620 C4BPBP20851 252 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 RAB13P51153 203 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 RPS16P62249 146 aaKnown RBP11.88□□□□□ -0.51
CBX3-201ENST00000337620 VAMP2P63027 116 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 PAX8Q06710 450 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 OR2F1Q13607 317 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 OPCMLQ14982 345 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 OR4A47Q6IF82 309 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 MAPK1IP1LQ8NDC0 245 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 OR4A16Q8NH70 328 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 HARBI1Q96MB7 349 aa11.88□□□□□ -0.51
CBX3-201ENST00000337620 TRAV3A0A0B4J244 114 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 PAX6P26367 422 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 OR2B8PP59922 312 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
CBX3-201ENST00000337620 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
CBX3-201ENST00000337620 UBE2E1P51965 193 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 ZNF345Q14585 488 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 TMEM177Q53S58 311 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 KCNRGQ8N5I3 272 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 AIFM2Q9BRQ8 373 aa11.87□□□□□ -0.51
CBX3-201ENST00000337620 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
CBX3-201ENST00000337620 A0A096LNT2 108 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 FAM90A9PA6NNJ1 464 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 SYNGR2O43760 224 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 HKR1P10072 659 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 IFITM2Q01629 132 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 TNFRSF9Q07011 255 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 SSX2Q16385 188 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 Q96MF0 132 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 AQP10Q96PS8 301 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 QTRT1Q9BXR0 403 aaKnown RBP11.86□□□□□ -0.51
CBX3-201ENST00000337620 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 MS4A7Q9GZW8 240 aaPredicted RBP11.86□□□□□ -0.51
CBX3-201ENST00000337620 HIF1ANQ9NWT6 349 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 A0A1W2PPI3 338 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 FAM90A26D6RGX4 464 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 TIMM23O14925 209 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 IAPPP10997 89 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 P2RY1P47900 373 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 CAV2P51636 162 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 UBE2KP61086 200 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 RELBQ01201 579 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 POU2AF1Q16633 256 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 RBKSQ9H477 322 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 HSPB7Q9UBY9 170 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 AUP1Q9Y679 476 aa11.86□□□□□ -0.51
CBX3-201ENST00000337620 KANTRA0A1W2PQU2 76 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 TMEM50AO95807 157 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 IFNA17P01571 189 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 SAA1P0DJI8 122 aaPredicted RBP11.85□□□□□ -0.51
CBX3-201ENST00000337620 ARHGDIBP52566 201 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
CBX3-201ENST00000337620 SPINK9Q5DT21 86 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 MINOS1Q5TGZ0 78 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 LINC01356Q8N9X3 169 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 RITA1Q96K30 269 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 GON7Q9BXV9 100 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 MINOS1-NBL1R4GNA1 71 aa11.85□□□□□ -0.51
CBX3-201ENST00000337620 CENPVL3A0A0U1RRI6 287 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 FAM24AA6NFZ4 105 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 PRSS57Q6UWY2 283 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 CLEC9AQ6UXN8 241 aa11.84□□□□□ -0.51
CBX3-201ENST00000337620 OR8H3Q8N146 312 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms