RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NOTCH3Q9UM47 2321 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 PDCD11Q14690 1871 aaKnown RBP13.73□□□□□ -0.21
NPHP3-201ENST00000337331 UCP2P55851 309 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 PSG5Q15238 335 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 BPIFA4PQ86YQ2 179 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 SLC17A3O00476 420 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 CDKN1AP38936 164 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 FGF12P61328 243 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 FAM90A2PQ658T7 463 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 SLC23A3Q6PIS1 610 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 A0A1W2PN81 502 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 ODAMA1E959 279 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 PDE6DO43924 150 aa13.73□□□□□ -0.21
NPHP3-201ENST00000337331 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 FA2HQ7L5A8 372 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 MRPL52Q86TS9 123 aaKnown RBP13.72□□□□□ -0.21
NPHP3-201ENST00000337331 PEF1Q9UBV8 284 aaKnown RBP13.72□□□□□ -0.21
NPHP3-201ENST00000337331 SNAI2O43623 268 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 CEACAM21Q3KPI0 293 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 TDRG1Q3Y452 100 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 TAF15Q92804 592 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPHP3-201ENST00000337331 VSIRQ9H7M9 311 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 PTPRDP23468 1912 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 C1QTNF9BB2RNN3 333 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 SP1P08047 785 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 KIR2DS2P43631 304 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 PMS2CLQ68D20 193 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 SFRP2Q96HF1 295 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
NPHP3-201ENST00000337331 AAMDCQ9H7C9 122 aa13.72□□□□□ -0.21
NPHP3-201ENST00000337331 FAM157AC9JC47 383 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 TGFBR3LH3BV60 316 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 ISLRO14498 428 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 APCSP02743 223 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 IL6RP08887 468 aaPredicted RBP13.71□□□□□ -0.21
NPHP3-201ENST00000337331 TTTY12Q9BZ98 90 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 IGKV1D-8A0A087WSZ0 117 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 TRAV30A0A087WSZ9 112 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 FOXC1Q12948 553 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 PET117Q6UWS5 81 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 ZBTB34Q8NCN2 500 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 CSN3P07498 182 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 C1QTNF9P0C862 333 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 PPOXP50336 477 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
NPHP3-201ENST00000337331 DOCK4Q8N1I0 1966 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 PLXNA1Q9UIW2 1896 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 LCTP09848 1927 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 PKDREJQ9NTG1 2253 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 A0A1W2PQM1 296 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 SSX8Q7RTT4 187 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 RTN4RQ9BZR6 473 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 ZNF71Q9NQZ8 489 aaPredicted RBP13.71□□□□□ -0.22
NPHP3-201ENST00000337331 ONECUT1Q9UBC0 465 aa13.71□□□□□ -0.22
NPHP3-201ENST00000337331 GAGE12BA1L429 117 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 SYNGR1O43759 233 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 S1PR2O95136 353 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 PFN1P07737 140 aaKnown RBP13.7□□□□□ -0.22
NPHP3-201ENST00000337331 NPY1RP25929 384 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 ACTL10Q5JWF8 245 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 INO80CQ6PI98 192 aaPredicted RBP13.7□□□□□ -0.22
NPHP3-201ENST00000337331 Q8NFD4 153 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 VSTM2AQ8TAG5 236 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 LOC285556D6RIA3 1793 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 A6NDN8 102 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 PROB1E7EW31 1015 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 KHDC1LQ5JSQ8 128 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 BHLHA15Q7RTS1 189 aaPredicted RBP13.7□□□□□ -0.22
NPHP3-201ENST00000337331 OR4F17Q8NGA8 305 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 TMEM171Q8WVE6 324 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 CADP27708 2225 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 ZNF785A8K8V0 405 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 C1orf174Q8IYL3 243 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
NPHP3-201ENST00000337331 CDC42EP3Q9UKI2 254 aa13.7□□□□□ -0.22
NPHP3-201ENST00000337331 IGHV1-45A0A0A0MS14 117 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 A0A0A6YYD4 124 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 NHLH1Q02575 133 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
NPHP3-201ENST00000337331 WDFY1Q8IWB7 410 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 TRAV38-1A0A0B4J264 116 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 LCN12Q6JVE5 192 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 SELENOHQ8IZQ5 122 aaKnown RBP13.69□□□□□ -0.22
NPHP3-201ENST00000337331 VWCEQ96DN2 955 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 QTRT1Q9BXR0 403 aaKnown RBP13.69□□□□□ -0.22
NPHP3-201ENST00000337331 TIAF1O95411 115 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 MAS1LP35410 378 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 LHFPL1Q86WI0 220 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 OR8B3Q8NGG8 313 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 HEATR1Q9H583 2144 aaKnown RBP13.69□□□□□ -0.22
NPHP3-201ENST00000337331 A0A1W2PRD5 423 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 A0A1W2PRF3 423 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 A0A1W2PRM7 423 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 TNXAQ16473 311 aa13.69□□□□□ -0.22
NPHP3-201ENST00000337331 GATAD1Q8WUU5 269 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms