RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
LIMK1-201ENST00000336180 VPS13CQ709C8 3753 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 ABCA1O95477 2261 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 WNK2Q9Y3S1 2297 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 A0A087X0M5 115 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 A0A1B0GX30 115 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 CEBPZOSA8MTT3 80 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 PITX3O75364 302 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 PAX6P26367 422 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 UBE2KP61086 200 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 RPL23AP62750 156 aaKnown RBP10.4□□□□□ -0.74
LIMK1-201ENST00000336180 TNFRSF9Q07011 255 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 C17orf58Q2M2W7 97 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 EIF5AL1Q6IS14 154 aaKnown RBP10.4□□□□□ -0.74
LIMK1-201ENST00000336180 LCN15Q6UWW0 184 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 BTNL8Q6UX41 500 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 H2BFWTQ7Z2G1 175 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 PRR7Q8TB68 274 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 PRO1933Q9H354 126 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 CELSR1Q9NYQ6 3014 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 C17orf100A8MU93 164 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 IFNL4K9M1U5 179 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 LHBP01229 141 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 IFNA17P01571 189 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 TNFSF4P23510 183 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 EIF5AP63241 154 aaKnown RBP10.39□□□□□ -0.75
LIMK1-201ENST00000336180 CT45A1Q5HYN5 189 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 CT45A3Q8NHU0 189 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 HCFC1P51610 2035 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 A0A1B0GU03 582 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 NPIPB11E5RHQ5 1161 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 LOXL3P58215 753 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 TCEAL7Q9BRU2 100 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 SLC25A31Q9H0C2 315 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 GAPDHP04406 335 aaKnown RBP10.39□□□□□ -0.75
LIMK1-201ENST00000336180 RPS23P62266 143 aaKnown RBP10.39□□□□□ -0.75
LIMK1-201ENST00000336180 DIAPH2-AS1Q14236 149 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 R3HDM4Q96D70 268 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 OR4C12Q96R67 309 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 GINS3Q9BRX5 216 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 IL19Q9UHD0 177 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
LIMK1-201ENST00000336180 CFAP46Q8IYW2 2715 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 C5orf52A6NGY3 159 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SNRPCP09234 159 aaKnown RBP10.38□□□□□ -0.75
LIMK1-201ENST00000336180 DANCRP0C864 163 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 BMI1P35226 326 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 CATR1Q13166 79 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 FAM169BQ8N8A8 192 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SAA2-SAA4A0A096LPE2 208 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SIAH2O43255 324 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SAA2P0DJI9 122 aaPredicted RBP10.38□□□□□ -0.75
LIMK1-201ENST00000336180 DDTP30046 118 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 RBPJQ06330 500 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 MZT1Q08AG7 82 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 STUMQ69YW2 141 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SPNS3Q6ZMD2 512 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SSX7Q7RTT5 188 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 CD300LFQ8TDQ1 290 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 RXFP4Q8TDU9 374 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 WFDC12Q8WWY7 111 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 IFI27L2Q9H2X8 130 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 CACNA1AO00555 2505 aa10.38□□□□□ -0.75
LIMK1-201ENST00000336180 SMCO3A2RU48 225 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 SHISA9B4DS77 424 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 UBE2CO00762 179 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 DUTP33316 252 aaKnown RBP10.37□□□□□ -0.75
LIMK1-201ENST00000336180 RAB2AP61019 212 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 DMRTA1Q5VZB9 504 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 ZNF835Q9Y2P0 537 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 TRGV10A0A0A0MS01 117 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 F2RL1P55085 397 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 GUK1Q16774 197 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 PPP1R35Q8TAP8 253 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 GFOD1Q9NXC2 390 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 MMP24Q9Y5R2 645 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 C1orf196B1AJZ1 125 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 GZMHP20718 246 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 SULT1A1P50225 295 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 EIF4E3Q8N5X7 224 aaKnown RBP10.37□□□□□ -0.75
LIMK1-201ENST00000336180 C14orf79Q96F83 325 aa10.37□□□□□ -0.75
LIMK1-201ENST00000336180 CISD1Q9NZ45 108 aaKnown RBP10.37□□□□□ -0.75
LIMK1-201ENST00000336180 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
LIMK1-201ENST00000336180 TFF3Q07654 80 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 HABP2Q14520 560 aaPredicted RBP10.36□□□□□ -0.75
LIMK1-201ENST00000336180 AKR1C8PQ5T2L2 129 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 ATP5SQ99766 215 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 ZNF665Q9H7R5 613 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 LRRC30A6NM36 301 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 GOSR1O95249 250 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 SNRNP70P08621 437 aaKnown RBP10.36□□□□□ -0.75
LIMK1-201ENST00000336180 SEC11BP0C7V7 166 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 CDC34P49427 236 aaPredicted RBP10.36□□□□□ -0.75
LIMK1-201ENST00000336180 RPL31P62899 125 aaKnown RBP10.36□□□□□ -0.75
LIMK1-201ENST00000336180 ZNF266Q14584 549 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 RNASE6Q93091 150 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms