RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CHODLQ9H9P2 273 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 CALYQ9NYX4 217 aa13.21□□□□□ -0.3
PDGFB-201ENST00000331163 MPPED1O15442 326 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 ACTL6BO94805 426 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 LGI3Q8N145 548 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 C14orf144Q96I85 54 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 TBPP20226 339 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 HERPUD1Q15011 391 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 KRTAP27-1Q3LI81 207 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 Q6P435 159 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 OR2G3Q8NGZ4 309 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 CELSR2Q9HCU4 2923 aa13.2□□□□□ -0.3
PDGFB-201ENST00000331163 CXCL1P09341 107 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 CTXN2P0C2S0 81 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 TLE4Q04727 773 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 RAB39BQ96DA2 213 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 SNX22Q96L94 193 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 WFDC1Q9HC57 220 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 H3BQ15 152 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 SAXO1Q8IYX7 474 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 PLEKHF2Q9H8W4 249 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 OR6C3Q9NZP0 311 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 IGKV1-6A0A0C4DH72 117 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 SLC35G3Q8N808 338 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 KDF1Q8NAX2 398 aaPredicted RBP13.19□□□□□ -0.3
PDGFB-201ENST00000331163 ATG101Q9BSB4 218 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 NAA60Q9H7X0 242 aa13.19□□□□□ -0.3
PDGFB-201ENST00000331163 CDX1P47902 265 aaPredicted RBP13.18□□□□□ -0.3
PDGFB-201ENST00000331163 MRPS11P82912 194 aaKnown RBP13.18□□□□□ -0.3
PDGFB-201ENST00000331163 CATR1Q13166 79 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF843Q8N446 348 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 FAM24AA6NFZ4 105 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 IFITM10A6NMD0 228 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 CEACAM18A8MTB9 384 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
PDGFB-201ENST00000331163 TESK1Q15569 626 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 NECAP1Q8NC96 275 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 OR5D13Q8NGL4 314 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 Q8WTZ3 238 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 SOX15O60248 233 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 MMP23AO75900 390 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 GZMHP20718 246 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 HOXA5P20719 270 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 ERVK-16P61578 105 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 DLK1P80370 383 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 OR8B3Q8NGG8 313 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 OR8B2Q96RD0 313 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 CACNG5Q9UF02 275 aa13.18□□□□□ -0.3
PDGFB-201ENST00000331163 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 VAX1Q5SQQ9 334 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 SP5Q6BEB4 398 aaPredicted RBP13.17□□□□□ -0.3
PDGFB-201ENST00000331163 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
PDGFB-201ENST00000331163 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
PDGFB-201ENST00000331163 UTF1Q5T230 341 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 H2BFWTQ7Z2G1 175 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 OR52M1Q8NGK5 317 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 S1PR3Q99500 378 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 CBLN4Q9NTU7 201 aa13.17□□□□□ -0.3
PDGFB-201ENST00000331163 FN1P02751 2386 aaKnown RBP13.17□□□□□ -0.3
PDGFB-201ENST00000331163 TMEM178BH3BS89 294 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 SMAD7O15105 426 aaKnown RBP13.16□□□□□ -0.3
PDGFB-201ENST00000331163 DEDDO75618 318 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 RUNX1Q01196 453 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 CYB561D1Q8N8Q1 229 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF714Q96N38 554 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 IGLV3-9A0A075B6K5 115 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 ZFP92A6NM28 416 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 DDTP30046 118 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 CD200P41217 278 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF124Q15973 351 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 BPESC1Q9GZL8 116 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 PPIAL4CA0A0B4J2A2 164 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 SLC31A2O15432 143 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 PPIAL4GP0DN37 164 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 MDH2P40926 338 aaKnown RBP13.16□□□□□ -0.3
PDGFB-201ENST00000331163 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
PDGFB-201ENST00000331163 RAB11AP62491 216 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF146Q15072 292 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 OR5T1Q8NG75 326 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 FBLN5Q9UBX5 448 aa13.16□□□□□ -0.3
PDGFB-201ENST00000331163 A0A1W2PPR1 153 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.15□□□□□ -0.3
PDGFB-201ENST00000331163 MMP9P14780 707 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 MPZP25189 248 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 TEP1Q99973 2627 aaKnown RBP13.15□□□□□ -0.3
PDGFB-201ENST00000331163 K7N7A8 449 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 DANCRP0C864 163 aa13.15□□□□□ -0.3
PDGFB-201ENST00000331163 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms