RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ERVFRD-1P60508 538 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 ERVK-16P61578 105 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 PDLIM3Q53GG5 364 aaPredicted RBP12.02□□□□□ -0.49
TPM3-206ENST00000330188 RBMS3Q6XE24 437 aaKnown RBP12.02□□□□□ -0.49
TPM3-206ENST00000330188 TCF23Q7RTU1 214 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 Q8N7P7 452 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 RAB9BQ9NP90 201 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 TRAV3A0A0B4J244 114 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 MKRN2OSH3BPM6 223 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 VDAC2P45880 294 aaPredicted RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 MEF2BQ02080 365 aaPredicted RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 TLE1Q04724 770 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 DEFB108BQ8NET1 73 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 NUP37Q8NFH4 326 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 ACTR3CQ9C0K3 210 aaPredicted RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 TMEM140Q9NV12 185 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 DYSFO75923 2080 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 TRGV10A0A0A0MS01 117 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 C17orf112F2Z3M2 114 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 TNFSF4P23510 183 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 RPS10P46783 165 aaKnown RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 MEOX2P50222 304 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 TDGF1P3P51864 188 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 WDR25Q64LD2 544 aaPredicted RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 DOLPP1Q86YN1 238 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 METTL1Q9UBP6 276 aaKnown RBP12.01□□□□□ -0.49
TPM3-206ENST00000330188 Q9UFV3 132 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 WDR83OSQ9Y284 106 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 URGCP-MRPS24S4R325 110 aa12.01□□□□□ -0.49
TPM3-206ENST00000330188 GYPAP02724 150 aa12□□□□□ -0.49
TPM3-206ENST00000330188 CD1BP29016 333 aa12□□□□□ -0.49
TPM3-206ENST00000330188 FABP9Q0Z7S8 132 aa12□□□□□ -0.49
TPM3-206ENST00000330188 ZNF439Q8NDP4 499 aa12□□□□□ -0.49
TPM3-206ENST00000330188 RAB24Q969Q5 203 aa12□□□□□ -0.49
TPM3-206ENST00000330188 ABHD17AQ96GS6 310 aa12□□□□□ -0.49
TPM3-206ENST00000330188 CCL13Q99616 98 aa12□□□□□ -0.49
TPM3-206ENST00000330188 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
TPM3-206ENST00000330188 AKAP13Q12802 2813 aa12□□□□□ -0.49
TPM3-206ENST00000330188 BSNQ9UPA5 3926 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 PCP4L1A6NKN8 68 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 IFNA10P01566 189 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 RPP30P78346 268 aaKnown RBP11.99□□□□□ -0.49
TPM3-206ENST00000330188 FAM216BQ8N7L0 139 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 DIRC2Q96SL1 478 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 TGIF2-C20orf24A0A0A6YYL0 155 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 PRSS46E5RG02 174 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 PRRG2O14669 202 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 RRHO14718 337 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 GFRA3O60609 400 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 DEFA4P12838 97 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 PSMB3P49720 205 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 TEX36Q5VZQ5 186 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 TMEM108Q6UXF1 575 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
TPM3-206ENST00000330188 MANBALQ9NQG1 85 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 TMEM242Q9NWH2 141 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 IDI2-AS1Q9NZ38 188 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 MGAQ8IWI9 3026 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
TPM3-206ENST00000330188 AP4M1O00189 453 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 THBS3P49746 956 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 ACOT6Q3I5F7 207 aaPredicted RBP11.98□□□□□ -0.49
TPM3-206ENST00000330188 ZNF383Q8NA42 475 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 TMEM170AQ8WVE7 144 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 LINC00574Q9H8X3 128 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 TP53TG5Q9Y2B4 290 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 TRGV8A0A0C4DH27 118 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 ZNF729A6NN14 1252 aaPredicted RBP11.98□□□□□ -0.49
TPM3-206ENST00000330188 C15orf61A6NNL5 157 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 C16orf97H3BN30 126 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 CYB5BO43169 146 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 MMP23AO75900 390 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 IRF2P14316 349 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 RND2P52198 227 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 MRPS11P82912 194 aaKnown RBP11.98□□□□□ -0.49
TPM3-206ENST00000330188 WFDC8Q8IUA0 241 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 LYG1Q8N1E2 194 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 CORO2AQ92828 525 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 GGACTQ9BVM4 153 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 ELOVL5Q9NYP7 299 aa11.98□□□□□ -0.49
TPM3-206ENST00000330188 ICE1Q9Y2F5 2266 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 PLCE1Q9P212 2302 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 NBEAQ8NFP9 2946 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 DPRXA6NFQ7 191 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 SEC14L6B5MCN3 397 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 TMEM250H0YL14 139 aa11.97□□□□□ -0.49
TPM3-206ENST00000330188 NDUFS6O75380 124 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms